Project: 2665 (Run 0, Clone 520, Gen 98) CoreStatus = 0 (0)

Moderators: Site Moderators, FAHC Science Team

Post Reply
parkut
Posts: 365
Joined: Tue Feb 12, 2008 7:33 am
Hardware configuration: Running exclusively Linux headless blades. All are dedicated crunching machines.
Location: SE Michigan, USA

Project: 2665 (Run 0, Clone 520, Gen 98) CoreStatus = 0 (0)

Post by parkut »

model name : Intel(R) Core(TM)2 Quad CPU Q6600 @ 2.40GHz
cpu MHz : 2394.000
cache size : 4096 KB
Memory: 1.94 GB physical, 1.94 GB virtual
...
Client Version 6.24beta
Core Version 1.74 (November 27, 2006)

Project attempted to run twice, both times faulting fairly quickly. Have
since received a new WU and is processing normally

Code: Select all

[04:03:29] + Results successfully sent
[04:03:29] Thank you for your contribution to Folding@Home.
[04:03:29] + Number of Units Completed: 501

[04:07:34] - Warning: Could not delete all work unit files (2): Core returned invalid code
[04:07:34] Trying to send all finished work units
[04:07:34] + No unsent completed units remaining.
[04:07:34] - Preparing to get new work unit...
[04:07:34] + Attempting to get work packet
[04:07:34] - Will indicate memory of 1985 MB
[04:07:34] - Connecting to assignment server
[04:07:34] Connecting to http://assign.stanford.edu:8080/
[04:07:35] Posted data.
[04:07:35] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[04:07:35] + News From Folding@Home: Welcome to Folding@Home
[04:07:35] Loaded queue successfully.
[04:07:35] Connecting to http://171.64.65.64:8080/
[04:07:40] Posted data.
[04:07:40] Initial: 0000; - Receiving payload (expected size: 4735415)
[04:07:49] - Downloaded at ~513 kB/s
[04:07:49] - Averaged speed for that direction ~363 kB/s
[04:07:49] + Received work.
[04:07:49] Trying to send all finished work units
[04:07:49] + No unsent completed units remaining.
[04:07:49] + Closed connections
[04:07:49] 
[04:07:49] + Processing work unit
[04:07:49] Work type a1 not eligible for variable processors
[04:07:49] Core required: FahCore_a1.exe
[04:07:49] Core found.
[04:07:49] Working on queue slot 03 [March 18 04:07:49 UTC]
[04:07:49] + Working ...
-version 624'
[04:07:49] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work/ -suffix 03 -checkpoint 15 -verbose -lifeline 15441 

[04:07:49] 
[04:07:49] *------------------------------*
[04:07:49] Folding@Home Gromacs SMP Core
[04:07:49] Version 1.74 (November 27, 2006)
[04:07:49] 
[04:07:49] Preparing to commence simulation
[04:07:49] - Ensuring status. Please wait.
[04:07:50] - Starting from initial work packet
[04:07:50] 
[04:07:50] Project: 2665 (Run 0, Clone 520, Gen 98)
[04:07:50] 
[04:07:50] Assembly optimizations on if available.
[04:07:50] Entering M.D.
[04:08:07] al work pa- Starting from initial work packet
[04:08:07] 
[04:08:07] Project: 26Entering M.D.
[04:08:07] ne 520, Gen 98)
[04:08:07] 
[04:08:07] Entering M.D.
[04:08:13] Rejecting checkpoint
[04:08:14] 
[04:08:14] Writing local files
[04:08:14] Extra SSE boost OK.
[04:08:14] 
[04:08:15] Extra SSE boost OK.
[04:08:15] Writing local files
[04:08:15] Completed 0 out of 250000 steps  (0 percent)
[04:23:00] Writing local files
[04:23:00] Completed 2500 out of 250000 steps  (1 percent)
[04:23:55] Warning:  long 1-4 interactions
      Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
       Copyright (c) 1991-2000, University of Groningen, The Netherlands.
             Copyright (c) 2001-2004, The GROMACS development team,
            check out http://www.gromacs.org for more information.

        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[04:23:59] CoreStatus = 0 (0)
[04:23:59] Sending work to server
[04:23:59] Project: 2665 (Run 0, Clone 520, Gen 98)
[04:23:59] - Error: Could not get length of results file work/wuresults_03.dat
[04:23:59] - Error: Could not read unit 03 file. Removing from queue.
[04:23:59] Trying to send all finished work units
[04:23:59] + No unsent completed units remaining.
[04:23:59] - Preparing to get new work unit...
[04:23:59] + Attempting to get work packet
[04:23:59] - Will indicate memory of 1985 MB
[04:23:59] - Connecting to assignment server
[04:23:59] Connecting to http://assign.stanford.edu:8080/
[04:24:00] Posted data.
[04:24:00] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[04:24:00] + News From Folding@Home: Welcome to Folding@Home
[04:24:00] Loaded queue successfully.
[04:24:00] Connecting to http://171.64.65.64:8080/
[04:24:05] Posted data.
[04:24:05] Initial: 0000; - Receiving payload (expected size: 4735415)
[04:24:13] - Downloaded at ~578 kB/s
[04:24:13] - Averaged speed for that direction ~406 kB/s
[04:24:13] + Received work.
[04:24:13] Trying to send all finished work units
[04:24:13] + No unsent completed units remaining.
[04:24:13] + Closed connections
[04:24:18] 
[04:24:18] + Processing work unit
[04:24:18] Work type a1 not eligible for variable processors
[04:24:18] Core required: FahCore_a1.exe
[04:24:18] Core found.
[04:24:18] Working on queue slot 04 [March 18 04:24:18 UTC]
[04:24:18] + Working ...
-version 624'
[04:24:18] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work/ -suffix 04 -checkpoint 15 -verbose -lifeline 15441 

[04:24:18] 
[04:24:18] *------------------------------*
[04:24:18] Folding@Home Gromacs SMP Core
[04:24:18] Version 1.74 (November 27, 2006)
[04:24:18] 
[04:24:18] Preparing to commence simulation
[04:24:18] - Ensuring status. Please wait.
[04:24:35] - Looking at optimizations...
[04:24:35] - Working with standard loops on this execution.
[04:24:35] - Preated dyn
[04:24:35] - Files status OK
[04:24:35] as improper.
[04:24:35] - Going to use standard loops.
[04:24:35] - Files status OK
[04:24:36] Starting from initial work packet
[04:24:36] 
[04:24:36] Project: 2665 (Run 0, Clone 520, Gen 98)
[04:24:36] 
[04:24:36] Entering M.D.
[04:24:36] ne 520, Gen 98)
[04:24:36] 
[04:24:36] Entering M.D.
[04:24:36] ne 520, Gen 98)
[04:24:36] 
[04:24:36] Entering M.D.
[04:24:44] 
[04:24:44] cal files
[04:24:44] Extra SSE boost OK.
[04:24:44] ocal files
[04:24:44] Extra SSE boost OK.
[04:24:45] 0000 steps  (0 percent)
[04:39:26] Writing local files
[04:39:26] Completed 2500 out of 250000 steps  (1 percent)
[04:40:21] Warning:  long 1-4 interactions
      Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
       Copyright (c) 1991-2000, University of Groningen, The Netherlands.
             Copyright (c) 2001-2004, The GROMACS development team,
            check out http://www.gromacs.org for more information.

        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[04:40:25] CoreStatus = 0 (0)
[04:40:25] Sending work to server
[04:40:25] Project: 2665 (Run 0, Clone 520, Gen 98)
[04:40:25] - Error: Could not get length of results file work/wuresults_04.dat
[04:40:25] - Error: Could not read unit 04 file. Removing from queue.
[04:40:25] Trying to send all finished work units
[04:40:25] + No unsent completed units remaining.
toTOW
Site Moderator
Posts: 6434
Joined: Sun Dec 02, 2007 10:38 am
Location: Bordeaux, France
Contact:

Re: Project: 2665 (Run 0, Clone 520, Gen 98) CoreStatus = 0 (0)

Post by toTOW »

There's no data for this WU in the DB yet ... :(
Image

Folding@Home beta tester since 2002. Folding Forum moderator since July 2008.
susato
Site Moderator
Posts: 511
Joined: Fri Nov 30, 2007 4:57 am
Location: Team MacOSX
Contact:

Re: Project: 2665 (Run 0, Clone 520, Gen 98) CoreStatus = 0 (0)

Post by susato »

The preceding generation (97) was assigned at: 2009-03-16 16:44:10
and added to the stats database on 2009-03-17 21:44:26 for 1920 points of credit.
The time given is Stanford time (PDT = UTC-6) so add 6 hours to get UTC, which is 03:44:26
You got gen 98 at [March 18 04:07:49 UTC] just 15 minutes later, so you're the first to try folding it.

Thanks for letting us know.
parkut
Posts: 365
Joined: Tue Feb 12, 2008 7:33 am
Hardware configuration: Running exclusively Linux headless blades. All are dedicated crunching machines.
Location: SE Michigan, USA

Re: Project: 2665 (Run 0, Clone 520, Gen 98) CoreStatus = 0 (0)

Post by parkut »

Was assigned this WU on a different (yet identical) machine, with precisely the same result

...
model name : Intel(R) Core(TM)2 Quad CPU Q6600 @ 2.40GHz
cpu MHz : 2394.000
cache size : 4096 KB
Memory: 1.94 GB physical, 1.94 GB virtual
...
Client Version 6.24beta Core: FahCore_a1.exe
Core Version 1.74 (November 27, 2006)

Code: Select all

[01:58:21] + Number of Units Completed: 503

[01:58:22] - Warning: Could not delete all work unit files (6): Core file absent
[01:58:22] Trying to send all finished work units
[01:58:22] + No unsent completed units remaining.
[01:58:22] - Preparing to get new work unit...
[01:58:22] + Attempting to get work packet
[01:58:22] - Will indicate memory of 1985 MB
[01:58:22] - Connecting to assignment server
[01:58:22] Connecting to http://assign.stanford.edu:8080/
[01:58:23] Posted data.
[01:58:23] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[01:58:23] + News From Folding@Home: Welcome to Folding@Home
[01:58:23] Loaded queue successfully.
[01:58:23] Connecting to http://171.64.65.64:8080/
[01:58:28] Posted data.
[01:58:28] Initial: 0000; - Receiving payload (expected size: 4735415)
[01:58:42] - Downloaded at ~330 kB/s
[01:58:42] - Averaged speed for that direction ~365 kB/s
[01:58:42] + Received work.
[01:58:42] Trying to send all finished work units
[01:58:42] + No unsent completed units remaining.
[01:58:42] [01:58:42] + Closed connections
[01:58:42] + Processing work unit
[01:58:42] Work type a1 not eligible for variable processors
[01:58:42] Core required: FahCore_a1.exe
[01:58:42] Core found.
[01:58:42] Working on queue slot 07 [March 19 01:58:42 UTC]
[01:58:42] + Working ...
-version 624'
[01:58:42] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work/ -suffix 07 -checkpoint 15 -verbose -lifeline 15441 

[01:58:42]
[01:58:42] *------------------------------*
[01:58:42] Folding@Home Gromacs SMP Core
[01:58:42] [01:58:42] Version 1.74 (November 27, 2006)
[01:58:42] Preparing to commence simulation
[01:58:42] - Ensuring status. Please wait.
[01:58:42] - Files status OK
[01:58:43] - Expanded 4734903 -> 24426905 (decompressed 515.8 percent)
[01:58:43] [01:58:43] - Starting from initial work packet
[01:58:43] [01:58:43] Project: 2665 (Run 0, Clone 520, Gen 98)
[01:58:43] Assembly optimizations on if available.
[01:58:43] Entering M.D.
[01:59:00] [01:59:00] al work packet
[01:59:00] [01:59:00] Project: 2665 (Run 0, Clone 520, Gen 98)
[01:59:00] Entering M.D.
[01:59:00] [01:59:00] ne 520, Gen 98)
[01:59:00] Entering M.D.
[01:59:07] Rejecting checkpoint
[01:59:08] boost OK.
[01:59:08] [01:59:08] GG in waterExtra SSE boost OK.
[01:59:09] Extra SSE boost OK.
[01:59:09] Writing local files
[01:59:09] Completed 0 out of 250000 steps  (0 percent)
[02:13:53] Writing local files
[02:13:53] Completed 2500 out of 250000 steps  (1 percent)
[02:14:48] Warning:  long 1-4 interactions
      Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
       Copyright (c) 1991-2000, University of Groningen, The Netherlands.
             Copyright (c) 2001-2004, The GROMACS development team,
            check out http://www.gromacs.org for more information.

        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[02:14:52] CoreStatus = 0 (0)
[02:14:52] Sending work to server
[02:14:52] Project: 2665 (Run 0, Clone 520, Gen 98)
[02:14:52] - Error: Could not get length of results file work/wuresults_07.dat
[02:14:52] - Error: Could not read unit 07 file. Removing from queue.
[02:14:52] Trying to send all finished work units
[02:14:52] + No unsent completed units remaining.
toTOW
Site Moderator
Posts: 6434
Joined: Sun Dec 02, 2007 10:38 am
Location: Bordeaux, France
Contact:

Re: Project: 2665 (Run 0, Clone 520, Gen 98) CoreStatus = 0 (0)

Post by toTOW »

I've marked it as a bad WU.
Image

Folding@Home beta tester since 2002. Folding Forum moderator since July 2008.
parkut
Posts: 365
Joined: Tue Feb 12, 2008 7:33 am
Hardware configuration: Running exclusively Linux headless blades. All are dedicated crunching machines.
Location: SE Michigan, USA

Re: Project: 2665 (Run 0, Clone 520, Gen 98) CoreStatus = 0 (0)

Post by parkut »

I've been assigned the same WU again. Maybe marking it bad doesn't work?

Code: Select all

[19:05:55] Project: 2665 (Run 0, Clone 520, Gen 98)
[19:05:55] 
[19:05:55] Entering M.D.
[19:06:02] Protein: HGG in water
[19:06:02] Writing local files
[19:06:03] Extra SSE boost OK.
[19:06:04] 000 steps  (0 percent)
[19:20:45] Writing local files
[19:20:45] Completed 2500 out of 250000 steps  (1 percent)
[19:21:39] Warning:  long 1-4 interactions

[19:21:43] CoreStatus = 0 (0)
[19:21:43] Sending work to server
[19:21:43] Project: 2665 (Run 0, Clone 520, Gen 98)
[19:21:43] - Error: Could not get length of results file work/wuresults_09.dat
[19:21:43] - Error: Could not read unit 09 file. Removing from queue.
[19:21:43] Trying to send all finished work units
[19:21:43] + No unsent completed units remaining.
toTOW
Site Moderator
Posts: 6434
Joined: Sun Dec 02, 2007 10:38 am
Location: Bordeaux, France
Contact:

Re: Project: 2665 (Run 0, Clone 520, Gen 98) CoreStatus = 0 (0)

Post by toTOW »

This is not an automated process ... marking them as bad add the WU to a list ... but someone still have to look at the list, and manually remove (or test internally) the bad WU.
Image

Folding@Home beta tester since 2002. Folding Forum moderator since July 2008.
Post Reply