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--- Opening Log file [March 8 19:45:52]
# Linux Console Edition #######################################################
###############################################################################
Folding@Home Client Version 6.02
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /home/dimitris/folding
Executable: ./fah6
Arguments: -verbosity 9
[19:45:52] - Ask before connecting: No
[19:45:52] - User name: dimilunatic (Team 160082)
[19:45:52] - User ID: 390AFF597EF2A176
[19:45:52] - Machine ID: 1
[19:45:52]
[19:45:53] Loaded queue successfully.
[19:45:53] - Autosending finished units...
[19:45:53] Trying to send all finished work units
[19:45:53] + No unsent completed units remaining.
[19:45:53] - Autosend completed
[19:45:53] - Preparing to get new work unit...
[19:45:53] + Attempting to get work packet
[19:45:53] - Will indicate memory of 502 MB
[19:45:53] - Detect CPU. Vendor: GenuineIntel, Family: 6, Model: 13, Stepping: 8
[19:45:53] - Connecting to assignment server
[19:45:53] Connecting to http://assign.stanford.edu:8080/
[19:45:53] Posted data.
[19:45:53] Initial: 41AB; - Successful: assigned to (171.65.103.68).
[19:45:53] + News From Folding@Home: Welcome to Folding@Home
[19:45:53] Loaded queue successfully.
[19:45:53] Connecting to http://171.65.103.68:8080/
[19:45:59] Posted data.
[19:45:59] Initial: 0000; - Receiving payload (expected size: 3594272)
[19:47:13] - Downloaded at ~47 kB/s
[19:47:13] - Averaged speed for that direction ~126 kB/s
[19:47:13] + Received work.
[19:47:13] + Closed connections
[19:47:13]
[19:47:13] + Processing work unit
[19:47:13] Core required: FahCore_a0.exe
[19:47:13] Core not found.
[19:47:13] - Core is not present or corrupted.
[19:47:13] - Attempting to download new core...
[19:47:13] + Downloading new core: FahCore_a0.exe
[19:47:13] Downloading core (/~pande/Linux/x86/Core_a0.fah from www.stanford.edu)
[19:47:24] Initial: AFDE; + 10240 bytes downloaded
[19:47:24] Initial: 05BE; + 20480 bytes downloaded
[19:47:24] Initial: 4164; + 30720 bytes downloaded
[19:47:24] Initial: 6802; + 40960 bytes downloaded
[19:47:24] Initial: 2F56; + 51200 bytes downloaded
[19:47:24] Initial: 4D60; + 61440 bytes downloaded
[19:47:24] Initial: 1898; + 71680 bytes downloaded
[19:47:24] Initial: F160; + 81920 bytes downloaded
[19:47:24] Initial: 009D; + 92160 bytes downloaded
[19:47:24] Initial: EA70; + 102400 bytes downloaded
[19:47:24] Initial: F231; + 112640 bytes downloaded
[19:47:25] Initial: 8C5D; + 122880 bytes downloaded
[19:47:25] Initial: 0A32; + 133120 bytes downloaded
[19:47:25] Initial: EDA1; + 143360 bytes downloaded
[19:47:25] Initial: 37FF; + 153600 bytes downloaded
[19:47:25] Initial: 9CA6; + 163840 bytes downloaded
[19:47:25] Initial: AE59; + 174080 bytes downloaded
[19:47:25] Initial: 298D; + 184320 bytes downloaded
[19:47:25] Initial: 2779; + 194560 bytes downloaded
[19:47:25] Initial: B02C; + 204800 bytes downloaded
[19:47:25] Initial: 4D34; + 215040 bytes downloaded
[19:47:25] Initial: 35DB; + 225280 bytes downloaded
[19:47:25] Initial: D8D6; + 235520 bytes downloaded
[19:47:25] Initial: 84E0; + 245760 bytes downloaded
[19:47:25] Initial: D38B; + 256000 bytes downloaded
[19:47:25] Initial: CFC3; + 266240 bytes downloaded
[19:47:25] Initial: A7E6; + 276480 bytes downloaded
[19:47:25] Initial: 3061; + 286720 bytes downloaded
[19:47:25] Initial: E5E4; + 296960 bytes downloaded
[19:47:25] Initial: E90C; + 307200 bytes downloaded
[19:47:25] Initial: 945A; + 317440 bytes downloaded
[19:47:25] Initial: 8737; + 327680 bytes downloaded
[19:47:25] Initial: 4966; + 337920 bytes downloaded
[19:47:25] Initial: 8A31; + 348160 bytes downloaded
[19:47:25] Initial: B556; + 358400 bytes downloaded
[19:47:25] Initial: 37A6; + 368640 bytes downloaded
[19:47:25] Initial: E2EB; + 378880 bytes downloaded
[19:47:26] Initial: 0809; + 389120 bytes downloaded
[19:47:26] Initial: 290B; + 399360 bytes downloaded
[19:47:26] Initial: 3BBA; + 409600 bytes downloaded
[19:47:26] Initial: 073A; + 419840 bytes downloaded
[19:47:26] Initial: 7811; + 430080 bytes downloaded
[19:47:26] Initial: 170D; + 440320 bytes downloaded
[19:47:26] Initial: 233C; + 450560 bytes downloaded
[19:47:27] Initial: 973C; + 460800 bytes downloaded
[19:47:27] Initial: 900A; + 471040 bytes downloaded
[19:47:27] Initial: E5FA; + 481280 bytes downloaded
[19:47:27] Initial: 0E8D; + 491520 bytes downloaded
[19:47:27] Initial: 4D27; + 501760 bytes downloaded
[19:47:27] Initial: 1648; + 512000 bytes downloaded
[19:47:27] Initial: D8E0; + 522240 bytes downloaded
[19:47:27] Initial: 8D92; + 532480 bytes downloaded
[19:47:27] Initial: 508B; + 542720 bytes downloaded
[19:47:27] Initial: 8633; + 552960 bytes downloaded
[19:47:27] Initial: 88D8; + 563200 bytes downloaded
[19:47:28] Initial: E830; + 573440 bytes downloaded
[19:47:28] Initial: B49D; + 583680 bytes downloaded
[19:47:28] Initial: D550; + 593920 bytes downloaded
[19:47:28] Initial: A360; + 604160 bytes downloaded
[19:47:28] Initial: 4264; + 614400 bytes downloaded
[19:47:28] Initial: 76B8; + 624640 bytes downloaded
[19:47:28] Initial: 7FEA; + 634880 bytes downloaded
[19:47:28] Initial: F7B9; + 645120 bytes downloaded
[19:47:28] Initial: A841; + 655360 bytes downloaded
[19:47:28] Initial: 8CCE; + 665600 bytes downloaded
[19:47:28] Initial: 86A5; + 675840 bytes downloaded
[19:47:28] Initial: B7D7; + 686080 bytes downloaded
[19:47:28] Initial: 154D; + 696320 bytes downloaded
[19:47:28] Initial: A7E9; + 706560 bytes downloaded
[19:47:28] Initial: F64A; + 716800 bytes downloaded
[19:47:28] Initial: 073C; + 727040 bytes downloaded
[19:47:28] Initial: A499; + 737280 bytes downloaded
[19:47:28] Initial: B9AB; + 747520 bytes downloaded
[19:47:28] Initial: 0904; + 757760 bytes downloaded
[19:47:28] Initial: 0CB0; + 768000 bytes downloaded
[19:47:28] Initial: 9621; + 778240 bytes downloaded
[19:47:28] Initial: 1799; + 788480 bytes downloaded
[19:47:29] Initial: 3DF9; + 798720 bytes downloaded
[19:47:29] Initial: 37D3; + 808960 bytes downloaded
[19:47:29] Initial: 9F3F; + 819200 bytes downloaded
[19:47:29] Initial: 556A; + 829440 bytes downloaded
[19:47:29] Initial: DF5E; + 839680 bytes downloaded
[19:47:29] Initial: 68D1; + 849920 bytes downloaded
[19:47:29] Initial: A41E; + 860160 bytes downloaded
[19:47:29] Initial: 0FB1; + 870400 bytes downloaded
[19:47:29] Initial: 6A40; + 880640 bytes downloaded
[19:47:29] Initial: DA22; + 890880 bytes downloaded
[19:47:30] Initial: 9943; + 901120 bytes downloaded
[19:47:30] Initial: 234F; + 911360 bytes downloaded
[19:47:30] Initial: 2A50; + 921600 bytes downloaded
[19:47:30] Initial: 7ACA; + 931840 bytes downloaded
[19:47:30] Initial: EE91; + 942080 bytes downloaded
[19:47:30] Initial: CD3E; + 952320 bytes downloaded
[19:47:30] Initial: E87D; + 962560 bytes downloaded
[19:47:30] Initial: 725F; + 972800 bytes downloaded
[19:47:30] Initial: AF9E; + 980952 bytes downloaded
[19:47:30] Verifying core Core_a0.fah...
[19:47:31] Signature is VALID
[19:47:31]
[19:47:31] Trying to unzip core FahCore_a0.exe
[19:47:31] Decompressed FahCore_a0.exe (3055460 bytes) successfully
[19:47:31] + Core successfully engaged
[19:47:36]
[19:47:36] + Processing work unit
[19:47:36] Core required: FahCore_a0.exe
[19:47:36] Core found.
[19:47:36] Working on Unit 02 [March 8 19:47:36]
[19:47:36] + Working ...
[19:47:36] - Calling './FahCore_a0.exe -dir work/ -suffix 02 -priority 96 -checkpoint 3 -verbose -lifeline 6543 -version 602'
[19:47:36]
[19:47:36] *------------------------------*
[19:47:36] Folding@Home Gromacs 3.3 Core
[19:47:36] Version 1.92 (April 17. 2007)
[19:47:36]
[19:47:36] Preparing to commence simulation
[19:47:36] - Looking at optimizations...
[19:47:36] - Created dyn
[19:47:36] - Files status OK
[19:47:38] - Expanded 3593760 -> 16858811 (decompressed 469.1 percent)
[19:47:38] - Starting from initial work packet
[19:47:38]
[19:47:38] Project: 1487 (Run 0, Clone 202, Gen 39)
[19:47:38]
[19:47:38] Assembly optimizations on if available.
[19:47:38] Entering M.D.
Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2004, The GROMACS development team,
check out http://www.gromacs.org for more information.
This inclusion of Gromacs code in the Folding@Home Core is under
a special license (see http://folding.stanford.edu/gromacs.html)
specially granted to Stanford by the copyright holders. If you
are interested in using Gromacs, visit www.gromacs.org where
you can download a free version of Gromacs under
the terms of the GNU General Public License (GPL) as published
by the Free Software Foundation; either version 2 of the License,
or (at your option) any later version.
No option -tpi
starting mdrun 'p1487_DPPC_DOPC_CHOL'
1000000 steps, 2000.0 ps.
[19:47:46] Protein: p1487_DPPC_DOPC_CHOL
[19:47:46] Writing local files
[19:47:48] Extra 3DNow boost OK.
[19:47:48] Extra SSE boost OK.
[19:47:48] Warning: long 1-4 interactions
[19:47:49] Writing local files
[19:47:49] Completed 0 out of 1000000 steps (0 percent)
