Code: Select all
[20:50:03] - Ask before connecting: No
[20:50:03] - User name: alpha754293 (Team 596)
[20:50:03] - User ID: 1909DAEB5DAE563A
[20:50:03] - Machine ID: 2
[20:50:03]
[20:50:04] Loaded queue successfully.
[20:50:04]
[20:50:04] + Processing work unit
[20:50:04] Core required: FahCore_a2.exe
[20:50:04] Core found.
[20:50:04] Working on queue slot 08 [February 6 20:50:04 UTC]
[20:50:04] + Working ...
[20:50:04]
[20:50:04] *------------------------------*
[20:50:04] Folding@Home Gromacs SMP Core
[20:50:04] Version 2.02 (Wed Aug 27 13:11:25 PDT 2008)
[20:50:04]
[20:50:04] Preparing to commence simulation
[20:50:04] - Ensuring status. Please wait.
[20:50:13] - Looking at optimizations...
[20:50:13] - Working with standard loops on this execution.
[20:50:13] - Files status OK
[20:50:14] - Expanded 4836186 -> 24033557 (decompressed 496.9 percent)
[20:50:14] Called DecompressByteArray: compressed_data_size=4836186 data_size=24033557, decompressed_data_size=24033557 diff=0
[20:50:15] - Digital signature verified
[20:50:15]
[20:50:15] Project: 2671 (Run 51, Clone 11, Gen 82)
[20:50:15]
[20:50:15] Entering M.D.
NNODES=4, MYRANK=0, HOSTNAME=computenode
NNODES=4, MYRANK=2, HOSTNAME=computenode
NNODES=4, MYRANK=1, HOSTNAME=computenode
NNODES=4, MYRANK=3, HOSTNAME=computenode
NODEID=0 argc=19
NODEID=1 argc=19
NODEID=2 argc=19
NODEID=3 argc=19
:-) G R O M A C S (-:
Groningen Machine for Chemical Simulation
:-) VERSION 3.3.99_development_200800503 (-:
Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2008, The GROMACS development team,
check out http://www.gromacs.org for more information.
:-) mdrun (-:
Reading file work/wudata_08.tpr, VERSION 3.3.99_development_20070618 (single precision)
[20:50:21] Will resume from checkpoint file
Note: tpx file_version 48, software version 56
Making 1D domain decomposition 1 x 1 x 4
starting mdrun '22887 system in water'
250000 steps, 500.0 ps.
-------------------------------------------------------
Program mdrun, VERSION 3.3.99_development_200800503
Source code file: md.c, line: 933
Fatal error:
Checkpoint error on step 16172510
-------------------------------------------------------
Thanx for Using GROMACS - Have a Nice Day
Error on node 0, will try to stop all the nodes
Halting parallel program mdrun on CPU 0 out of 4
gcq#0: Thanx for Using GROMACS - Have a Nice Day
[cli_0]: aborting job:
application called MPI_Abort(MPI_COMM_WORLD, -1) - process 0
[20:50:23] Resuming from checkpoint
[20:50:23] fcSaveRestoreState: I/O failed dir=0, var=00002AAAAC037010, varsize=578340
[cli_1]: aborting job:
Fatal error in MPI_Sendrecv: Error message texts are not available
[0]0:Return code = 255
[0]1:Return code = 1
[0]2:Return code = 0, signaled with Quit
[0]3:Return code = 0, signaled with Quit
[20:50:27] CoreStatus = FF (255)
[20:50:27] Sending work to server
[20:50:27] Project: 2671 (Run 51, Clone 11, Gen 82)
[20:50:27] - Error: Could not get length of results file work/wuresults_08.dat
[20:50:27] - Error: Could not read unit 08 file. Removing from queue.
[20:50:27] + Closed connections
[20:50:27] + Paused after finishing unit
[20:50:27] Press Enter to continue, Ctrl-C to exit...
memtest passed. chipset heatsink is warm to the touch, but not super hot.