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[01:17:53]
[01:17:53] *------------------------------*
[01:17:53] Folding@Home Gromacs SMP Core
[01:17:53] Version 2.07 (Sun Apr 19 14:51:09 PDT 2009)
[01:17:53]
[01:17:53] Preparing to commence simulation
[01:17:53] - Ensuring status. Please wait.
[01:18:03] - Looking at optimizations...
[01:18:03] - Working with standard loops on this execution.
[01:18:03] - Files status OK
[01:18:04] - Expanded 4858088 -> 24043453 (decompressed 494.9 percent)
[01:18:04] Called DecompressByteArray: compressed_data_size=4858088 data_size=24
043453, decompressed_data_size=24043453 diff=0
[01:18:04] - Digital signature verified
[01:18:04]
[01:18:04] Project: 2676 (Run 2, Clone 193, Gen 56)
[01:18:04]
[01:18:04] Entering M.D.
[01:18:10] Using Gromacs checkpoints
NNODES=4, MYRANK=0, HOSTNAME=computenode
NNODES=4, MYRANK=3, HOSTNAME=computenode
NNODES=4, MYRANK=2, HOSTNAME=computenode
NNODES=4, MYRANK=1, HOSTNAME=computenode
NODEID=0 argc=23
NODEID=1 argc=23
                         :-)  G  R  O  M  A  C  S  (-:

                   Groningen Machine for Chemical Simulation

                 :-)  VERSION 4.0.99_development_20090307  (-:


      Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
NODEID=2 argc=23
NODEID=3 argc=23
       Copyright (c) 1991-2000, University of Groningen, The Netherlands.
             Copyright (c) 2001-2008, The GROMACS development team,
            check out http://www.gromacs.org for more information.


                                :-)  mdrun  (-:

Reading file work/wudata_05.tpr, VERSION 3.3.99_development_20070618 (single pre
cision)
Note: tpx file_version 48, software version 64

Reading checkpoint file work/wudata_05.cpt generated: Wed Apr 15 22:15:49 2009


-------------------------------------------------------
Program mdrun, VERSION 4.0.99_development_20090307
Source code file: checkpoint.c, line: 1151

Fatal error:
Checkpoint file is for a system of 147117 atoms, while the current system consis
ts of 147159 atoms
For more information and tips for trouble shooting please check the GROMACS Wiki
 at
http://wiki.gromacs.org/index.php/Errors
-------------------------------------------------------

Thanx for Using GROMACS - Have a Nice Day

Error on node 0, will try to stop all the nodes
Halting parallel program mdrun on CPU 0 out of 4

gcq#0: Thanx for Using GROMACS - Have a Nice Day

[cli_0]: aborting job:
application called MPI_Abort(MPI_COMM_WORLD, -1) - process 0
[07:09:35] - Autosending finished units... [April 28 07:09:35 UTC]
[07:09:35] Trying to send all finished work units
[07:09:35] + No unsent completed units remaining.
[07:09:35] - Autosend completed

Code: Select all

[01:17:53] 
[01:17:53] *------------------------------*
[01:17:53] Folding@Home Gromacs SMP Core
[01:17:53] Version 2.07 (Sun Apr 19 14:51:09 PDT 2009)
[01:17:53] 
[01:17:53] Preparing to commence simulation
[01:17:53] - Ensuring status. Please wait.
[01:18:03] - Looking at optimizations...
[01:18:03] - Working with standard loops on this execution.
[01:18:03] - Files status OK
[01:18:04] - Expanded 4858088 -> 24043453 (decompressed 494.9 percent)
[01:18:04] Called DecompressByteArray: compressed_data_size=4858088 data_size=24043453, decompressed_data_size=24043453 diff=0
[01:18:04] - Digital signature verified
[01:18:04] 
[01:18:04] Project: 2676 (Run 2, Clone 193, Gen 56)
[01:18:04] 
[01:18:04] Entering M.D.
[01:18:10] Using Gromacs checkpoints
[07:09:35] - Autosending finished units... [April 28 07:09:35 UTC]
[07:09:35] Trying to send all finished work units
[07:09:35] + No unsent completed units remaining.
[07:09:35] - Autosend completed
[11:49:25] ***** Got an Activate signal (2)
[11:49:25] Killing all core threads

Folding@Home Client Shutdown.