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Project: 2669 (Run 15, Clone 108, Gen 86)

Posted: Sun Apr 26, 2009 1:09 pm
by road-runner
Looks like this one has to many steps...

Code: Select all

[01:08:11] Project: 2669 (Run 15, Clone 108, Gen 86)
[01:08:11] 
[01:08:11] Assembly optimizations on if available.
[01:08:11] Entering M.D.
[01:08:20] un 15, Clone 108, Gen 86)
[01:08:20] 
[01:08:20] Entering M.D.
NNODES=4, MYRANK=1, HOSTNAME=Office-Quad1
NNODES=4, MYRANK=2, HOSTNAME=Office-Quad1
NNODES=4, MYRANK=0, HOSTNAME=Office-Quad1
NNODES=4, MYRANK=3, HOSTNAME=Office-Quad1
NODEID=1 argc=20
NODEID=0 argc=20
                         NODEID=2 argc=20
NODEID=3 argc=20
:-)  G  R  O  M  A  C  S  (-:

                   Groningen Machine for Chemical Simulation

                 :-)  VERSION 4.0.99_development_20090307  (-:


      Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
       Copyright (c) 1991-2000, University of Groningen, The Netherlands.
             Copyright (c) 2001-2008, The GROMACS development team,
            check out http://www.gromacs.org for more information.


                                :-)  mdrun  (-:

Reading file work/wudata_06.tpr, VERSION 3.3.99_development_20070618 (single precision)
Note: tpx file_version 48, software version 64

NOTE: The tpr file used for this simulation is in an old format, for less memory usage and possibly more performance create a new tpr file with an up to date version of grompp

Making 1D domain decomposition 1 x 1 x 4
starting mdrun '22869 system'
21750000 steps,  43500.0 ps (continuing from step 7019007,  14038.0 ps).
[01:08:28] Completed 0 out of 14730993 steps  (0%)
[13:28:11] Completed 147310 out of 14730993 steps  (1%)
[01:39:01] Completed 294620 out of 14730993 steps  (2%)
[14:05:50] Completed 441930 out of 14730993 steps  (3%)
[02:20:47] Completed 589240 out of 14730993 steps  (4%)


Re: Project: 2669 (Run 15, Clone 108, Gen 86)

Posted: Sun Apr 26, 2009 4:02 pm
by susato
Yep, sure does - I'll mark it bad.

Do you still have the unitinfo.txt file from this one? Is it huge, e.g. megabytes rather than kilobytes in size?

Re: Project: 2669 (Run 15, Clone 108, Gen 86)

Posted: Mon Apr 27, 2009 2:34 am
by road-runner
Says its only 356 bytes...