Project: 2665 (Run 3, Clone 418, Gen 45)
Posted: Tue Sep 23, 2008 11:48 am
Log snippet attached. Client retried the same WU 5 times before getting a different one from the server. I've uploaded a qfixed result file.
Warning: long 1-4 interactions
Warning: long 1-4 interactions
Code: Select all
[09:26:12] + Processing work unit
[09:26:12] Work type a1 not eligible for variable processors
[09:26:12] Core required: FahCore_a1.exe
[09:26:12] Core found.
[09:26:12] Working on queue slot 08 [September 23 09:26:12 UTC]
[09:26:12] + Working ...
[09:26:12] - Calling 'mpiexec -np 4 -channel shm -env MPICH_USE_SMP_OPTIMIZATIONS 1 -host 127.0.0.1 FahCore_a1.exe -dir work/ -suffix 08 -checkpoint 16 -verbose -lifeline 3528 -version 622'
[09:26:12]
[09:26:12] *------------------------------*
[09:26:12] Folding@Home Gromacs SMP Core
[09:26:12] Version 1.76 (February 23, 2008)
[09:26:12]
[09:26:12] Preparing to commence simulation
[09:26:12] - Ensuring status. Please wait.
[09:26:29] - Looking at optimizations...
[09:26:29] - Working with standard loops on this execution.
[09:26:29] - Created dyn
[09:26:29] - Files status OK
[09:26:39] - Expanded 4718270 -> 24426905 (decompressed 517.7 percent)
[09:26:39] - Starting from initial work packet
[09:26:39]
[09:26:39] Project: 2665 (Run 3, Clone 418, Gen 45)
[09:26:39]
[09:26:42] Entering M.D.
[09:26:48] Rejecting checkpoint
[09:26:50] Protein: HGG in water
[09:26:50] Writing local files
[09:26:56] Extra SSE boost OK.
[09:26:57] Writing local files
[09:26:57] Completed 0 out of 250000 steps (0 percent)
[09:40:37] Writing local files
[09:40:37] Completed 2500 out of 250000 steps (1 percent)
[09:54:18] Writing local files
[09:54:18] Completed 5000 out of 250000 steps (2 percent)
[10:08:00] Writing local files
[10:08:00] Completed 7500 out of 250000 steps (3 percent)
[10:21:40] Writing local files
[10:21:40] Completed 10000 out of 250000 steps (4 percent)
[10:35:21] Writing local files
[10:35:21] Completed 12500 out of 250000 steps (5 percent)
[10:43:40] Warning: long 1-4 interactions
[10:43:41] Gromacs cannot continue further.
[10:43:41] Going to send back what have done.
[10:43:41] logfile size: 18840
[10:43:41] - Writing 19376 bytes of core data to disk...
[10:43:41] ... Done.
[10:43:41] - Failed to delete work/wudata_08.sas
[10:43:41] - Failed to delete work/wudata_08.goe
[10:43:41] Warning: check for stray files
[10:43:41]
[10:43:41] Folding@home Core Shutdown: EARLY_UNIT_END
[10:43:41]
[10:43:41] Folding@home Core Shutdown: EARLY_UNIT_END
[10:43:44] CoreStatus = 63 (99)
[10:43:44] + Error starting Folding@Home core.
[10:43:44] - Attempting to download new core...
[10:43:44] + Downloading new core: FahCore_a1.exe
[10:43:44] Downloading core (/~pande/Win32/x86_Deino/Core_a1.fah from www.stanford.edu)
[10:43:45] Initial: AFDE; + 10240 bytes downloaded
