It is the first WU I completed with a quad core linux server,
but the points for it did not show up so I think it may not have worked correctly.
username Mr_ThunderFrog
Team 170070
I have 2 PS3s and a dual core windows box folding ok.
I just started folding with a quad core ubuntu box.
My network connection is not reliable. I had no network connection when the WU was 100%.
Looking at the log it appears to have deleted the finished WU and downloaded another when the connection was re-established.
It downloaded another WU, which will take about 2 days to complete.
There is little point in completing this if the same thing is likely to happen again.
Code: Select all
root@mozart:/home/fah# ./fah
Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.
4 cores detected
--- Opening Log file [February 18 00:54:14 UTC]
# Linux SMP Console Edition ###################################################
###############################################################################
Folding@Home Client Version 6.29
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /home/fah
Executable: ./fah6
Arguments: -smp 4 -verbosity 9
[00:54:14] Configuring Folding@Home...
User name [Anonymous]? Mr_ThunderFrog
Team Number [0]? 170070
Passkey []? 1ad30b08362b305cf813124172b5fb71
Ask before fetching/sending work (no/yes) [no]?
Use proxy (yes/no) [no]?
Acceptable size of work assignment and work result packets (bigger units
may have large memory demands) -- 'small' is <5MB, 'normal' is <10MB, and
'big' is >10MB (small/normal/big) [normal]? big
Change advanced options (yes/no) [no]?
[00:55:53] - Ask before connecting: No
[00:55:53] - User name: Mr_ThunderFrog (Team 170070)
[00:55:53] - User ID not found locally
[00:55:53] + Requesting User ID from server
[00:55:53] - Getting ID from AS:
[00:55:53] Connecting to http://assign.stanford.edu:8080/
[00:55:58] Posted data.
[00:55:58] Initial: 5F25; - Received User ID = 255F603D6D035F9E
[00:55:58] - Machine ID: 1
[00:55:58]
[00:55:58] Work directory not found. Creating...
[00:55:58] Could not open work queue, generating new queue...
[00:55:58] - Autosending finished units... [February 18 00:55:58 UTC]
[00:55:58] Trying to send all finished work units
[00:55:58] + No unsent completed units remaining.
[00:55:58] - Autosend completed
[00:55:58] - Preparing to get new work unit...
[00:55:58] Cleaning up work directory
[00:55:58] + Attempting to get work packet
[00:55:58] Passkey found
[00:55:58] - Will indicate memory of 3962 MB
[00:55:58] - Connecting to assignment server
[00:55:58] Connecting to http://assign.stanford.edu:8080/
[00:56:00] Posted data.
[00:56:00] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[00:56:00] + News From Folding@Home: Welcome to Folding@Home
[00:56:00] Loaded queue successfully.
[00:56:00] Connecting to http://171.64.65.64:8080/
[00:56:04] Posted data.
[00:56:04] Initial: 0000; - Receiving payload (expected size: 2441558)
[00:58:04] - Downloaded at ~19 kB/s
[00:58:04] - Averaged speed for that direction ~19 kB/s
[00:58:04] + Received work.
[00:58:05] + Closed connections
[00:58:05]
[00:58:05] + Processing work unit
[00:58:05] Work type a1 not eligible for variable processors
[00:58:05] Core required: FahCore_a1.exe
[00:58:05] Core not found.
[00:58:05] - Core is not present or corrupted.
[00:58:05] - Attempting to download new core...
[00:58:05] + Downloading new core: FahCore_a1.exe
[00:58:05] Downloading core (/~pande/Linux/AMD64/Core_a1.fah from www.stanford.edu)
[00:58:09] Initial: AFDE; + 10240 bytes downloaded
[00:58:11] Initial: B54E; + 20480 bytes downloaded
[00:58:12] Initial: D6C2; + 30720 bytes downloaded
[00:58:12] Initial: 9F08; + 40960 bytes downloaded
[00:58:12] Initial: C6C3; + 51200 bytes downloaded
[00:58:14] Initial: EBA8; + 61440 bytes downloaded
[00:58:14] Initial: 3141; + 71680 bytes downloaded
[00:58:15] Initial: D218; + 81920 bytes downloaded
[00:58:16] Initial: F7AC; + 92160 bytes downloaded
[00:58:18] Initial: 820B; + 102400 bytes downloaded
[00:58:18] Initial: 1B1E; + 112640 bytes downloaded
[00:58:18] Initial: C249; + 122880 bytes downloaded
[00:58:18] Initial: 5EBD; + 133120 bytes downloaded
[00:58:20] Initial: CD6C; + 143360 bytes downloaded
[00:58:20] Initial: 221C; + 153600 bytes downloaded
[00:58:20] Initial: DB18; + 163840 bytes downloaded
[00:58:23] Initial: 237E; + 174080 bytes downloaded
[00:58:23] Initial: AEEC; + 184320 bytes downloaded
[00:58:23] Initial: 4C66; + 194560 bytes downloaded
[00:58:23] Initial: AE1E; + 204800 bytes downloaded
[00:58:24] Initial: A37E; + 215040 bytes downloaded
[00:58:24] Initial: 8193; + 225280 bytes downloaded
[00:58:24] Initial: 9F05; + 235520 bytes downloaded
[00:58:24] Initial: AAA5; + 245760 bytes downloaded
[00:58:27] Initial: 6400; + 256000 bytes downloaded
[00:58:27] Initial: 6E3D; + 266240 bytes downloaded
[00:58:27] Initial: EA6B; + 276480 bytes downloaded
[00:58:31] Initial: 820A; + 286720 bytes downloaded
[00:58:31] Initial: DE6D; + 296960 bytes downloaded
[00:58:31] Initial: B97B; + 307200 bytes downloaded
[00:58:31] Initial: 9D5D; + 317440 bytes downloaded
[00:58:32] Initial: 91D7; + 327680 bytes downloaded
[00:58:32] Initial: BB3B; + 337920 bytes downloaded
[00:58:32] Initial: 611B; + 348160 bytes downloaded
[00:58:32] Initial: B290; + 358400 bytes downloaded
[00:58:32] Initial: B0AA; + 368640 bytes downloaded
[00:58:32] Initial: 6A85; + 378880 bytes downloaded
[00:58:32] Initial: BF10; + 389120 bytes downloaded
[00:58:32] Initial: A818; + 399360 bytes downloaded
[00:58:32] Initial: 90E1; + 409600 bytes downloaded
[00:58:33] Initial: 2869; + 419840 bytes downloaded
[00:58:33] Initial: CAFE; + 430080 bytes downloaded
[00:58:33] Initial: 414B; + 440320 bytes downloaded
[00:58:33] Initial: 9B7A; + 450560 bytes downloaded
[00:58:34] Initial: 33AA; + 460800 bytes downloaded
[00:58:34] Initial: B1D5; + 471040 bytes downloaded
[00:58:34] Initial: 0206; + 481280 bytes downloaded
[00:58:35] Initial: 11F4; + 491520 bytes downloaded
[00:58:36] Initial: 31B5; + 501760 bytes downloaded
[00:58:36] Initial: 46B2; + 512000 bytes downloaded
[00:58:36] Initial: 3113; + 522240 bytes downloaded
[00:58:38] Initial: 525A; + 532480 bytes downloaded
[00:58:38] Initial: 66F9; + 542720 bytes downloaded
[00:58:39] Initial: 9672; + 552960 bytes downloaded
[00:58:40] Initial: 9058; + 563200 bytes downloaded
[00:58:40] Initial: 49ED; + 573440 bytes downloaded
[00:58:40] Initial: 515D; + 583680 bytes downloaded
[00:58:40] Initial: CAC0; + 593920 bytes downloaded
[00:58:41] Initial: 0B15; + 604160 bytes downloaded
[00:58:41] Initial: 5A89; + 614400 bytes downloaded
[00:58:41] Initial: 0F31; + 624640 bytes downloaded
[00:58:43] Initial: 2BC3; + 634880 bytes downloaded
[00:58:43] Initial: 3C06; + 645120 bytes downloaded
[00:58:43] Initial: 89C7; + 655360 bytes downloaded
[00:58:44] Initial: 6C54; + 665600 bytes downloaded
[00:58:45] Initial: 8D4D; + 675840 bytes downloaded
[00:58:45] Initial: EA59; + 686080 bytes downloaded
[00:58:47] Initial: C563; + 696320 bytes downloaded
[00:58:47] Initial: 8D45; + 706560 bytes downloaded
[00:58:48] Initial: 9BD0; + 716800 bytes downloaded
[00:58:53] Initial: 130C; + 727040 bytes downloaded
[00:58:54] Initial: CDA1; + 737280 bytes downloaded
[00:58:54] Initial: 7681; + 747520 bytes downloaded
[00:58:55] Initial: 1110; + 757760 bytes downloaded
[00:58:55] Initial: EE35; + 768000 bytes downloaded
[00:58:55] Initial: E5E1; + 778240 bytes downloaded
[00:58:55] Initial: 4B97; + 788480 bytes downloaded
[00:58:55] Initial: 4D75; + 798720 bytes downloaded
[00:58:55] Initial: E268; + 808960 bytes downloaded
[00:58:55] Initial: FAC6; + 819200 bytes downloaded
[00:58:55] Initial: A625; + 829440 bytes downloaded
[00:58:55] Initial: A12A; + 839680 bytes downloaded
[00:58:55] Initial: 83A3; + 849920 bytes downloaded
[00:58:55] Initial: 3BEA; + 860160 bytes downloaded
[00:58:57] Initial: 5298; + 870400 bytes downloaded
[00:58:57] Initial: 4811; + 880640 bytes downloaded
[00:58:58] Initial: EB07; + 890880 bytes downloaded
[00:58:58] Initial: 83FC; + 901120 bytes downloaded
[00:58:58] Initial: FA4E; + 911360 bytes downloaded
[00:58:58] Initial: 2945; + 921600 bytes downloaded
[00:58:59] Initial: 6BC9; + 931840 bytes downloaded
[00:59:00] Initial: E495; + 942080 bytes downloaded
[00:59:01] Initial: 1050; + 952320 bytes downloaded
[00:59:01] Initial: 2070; + 962560 bytes downloaded
[00:59:01] Initial: 1083; + 972800 bytes downloaded
[00:59:01] Initial: 96E5; + 983040 bytes downloaded
[00:59:01] Initial: 3EEE; + 993280 bytes downloaded
[00:59:02] Initial: 84AC; + 1003520 bytes downloaded
[00:59:03] Initial: 3B6B; + 1013760 bytes downloaded
[00:59:03] Initial: 3030; + 1024000 bytes downloaded
[00:59:03] Initial: 4B95; + 1034240 bytes downloaded
[00:59:03] Initial: D9BC; + 1044480 bytes downloaded
[00:59:03] Initial: C5B8; + 1054720 bytes downloaded
[00:59:03] Initial: A5EF; + 1064960 bytes downloaded
[00:59:03] Initial: 28DC; + 1075200 bytes downloaded
[00:59:03] Initial: 0943; + 1085440 bytes downloaded
[00:59:03] Initial: 338A; + 1095680 bytes downloaded
[00:59:04] Initial: ADFC; + 1105920 bytes downloaded
[00:59:04] Initial: ED39; + 1116160 bytes downloaded
[00:59:04] Initial: D284; + 1126400 bytes downloaded
[00:59:04] Initial: 0057; + 1136640 bytes downloaded
[00:59:05] Initial: 3E65; + 1146880 bytes downloaded
[00:59:05] Initial: FCB5; + 1157120 bytes downloaded
[00:59:05] Initial: A7D8; + 1167360 bytes downloaded
[00:59:05] Initial: A564; + 1177600 bytes downloaded
[00:59:06] Initial: 7654; + 1187840 bytes downloaded
[00:59:06] Initial: 0848; + 1198080 bytes downloaded
[00:59:06] Initial: 471E; + 1208320 bytes downloaded
[00:59:07] Initial: A7F3; + 1218560 bytes downloaded
[00:59:07] Initial: FA59; + 1228800 bytes downloaded
[00:59:07] Initial: FBF2; + 1239040 bytes downloaded
[00:59:07] Initial: F54E; + 1249280 bytes downloaded
[00:59:07] Initial: 3023; + 1259520 bytes downloaded
[00:59:07] Initial: AB37; + 1269760 bytes downloaded
[00:59:08] Initial: 0896; + 1280000 bytes downloaded
[00:59:08] Initial: 756D; + 1290240 bytes downloaded
[00:59:08] Initial: C1E7; + 1300480 bytes downloaded
[00:59:08] Initial: 9AAC; + 1310720 bytes downloaded
[00:59:08] Initial: E5AF; + 1320960 bytes downloaded
[00:59:09] Initial: BBE3; + 1331200 bytes downloaded
[00:59:09] Initial: 3596; + 1341440 bytes downloaded
[00:59:09] Initial: 924C; + 1351680 bytes downloaded
[00:59:10] Initial: 30B7; + 1361920 bytes downloaded
[00:59:10] Initial: AEB7; + 1372160 bytes downloaded
[00:59:10] Initial: 7D25; + 1382400 bytes downloaded
[00:59:10] Initial: 0FEB; + 1392640 bytes downloaded
[00:59:10] Initial: 3131; + 1402880 bytes downloaded
[00:59:10] Initial: 755F; + 1413120 bytes downloaded
[00:59:11] Initial: 4800; + 1423360 bytes downloaded
[00:59:11] Initial: 1282; + 1433600 bytes downloaded
[00:59:11] Initial: B2A3; + 1443840 bytes downloaded
[00:59:12] Initial: 21E9; + 1454080 bytes downloaded
[00:59:12] Initial: 789E; + 1464320 bytes downloaded
[00:59:12] Initial: 8542; + 1474560 bytes downloaded
[00:59:13] Initial: 3A56; + 1484800 bytes downloaded
[00:59:13] Initial: D4FE; + 1490945 bytes downloaded
[00:59:13] Verifying core Core_a1.fah...
[00:59:13] Signature is VALID
[00:59:13]
[00:59:13] Trying to unzip core FahCore_a1.exe
[00:59:14] Decompressed FahCore_a1.exe (3625104 bytes) successfully
[00:59:14] + Core successfully engaged
[00:59:38]
[00:59:38] + Processing work unit
[00:59:38] Work type a1 not eligible for variable processors
[00:59:38] Core required: FahCore_a1.exe
[00:59:38] Core found.
[00:59:38] Working on queue slot 01 [February 18 00:59:38 UTC]
[00:59:38] + Working ...
[00:59:38] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work/ -nice 19 -suffix 01 -checkpoint 15 -verbose -lifeline 3315 -version 629'
[00:59:38]
[00:59:38] *------------------------------*
[00:59:38] Folding@Home Gromacs SMP Core
[00:59:38] Version 1.74 (November 27, 2006)
[00:59:38]
[00:59:38] Preparing to commence simulation
[00:59:38] - Ensuring status. Please wait.
[00:59:38] - Starting from initial work packet
[00:59:38]
[00:59:38] Project: 2653 (Run 31, Clone 57, Gen 142)
[00:59:38]
[00:59:38] Assembly optimizations on if available.
[00:59:38] Entering M.D.
[00:59:56] l work packet
[00:59:56]
[00:59:56] Project: 2653 (Run 31, Clone 57, Gen 142)
[00:59:56]
[00:59:56] Entering M.D.
[00:59:56] ne 57, Gen 142)
[00:59:56]
[00:59:56] Entering M.D.
NNODES=4, MYRANK=0, HOSTNAME=mozart
NNODES=4, MYRANK=3, HOSTNAME=mozart
NNODES=4, MYRANK=1, HOSTNAME=mozart
NNODES=4, MYRANK=2, HOSTNAME=mozart
NODEID=0 argc=15
NODEID=3 argc=15
NODEID=1 argc=15
NODEID=2 argc=15
Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2004, The GROMACS development team,
check out http://www.gromacs.org for more information.
This inclusion of Gromacs code in the Folding@Home Core is under
a special license (see http://folding.stanford.edu/gromacs.html)
specially granted to Stanford by the copyright holders. If you
are interested in using Gromacs, visit www.gromacs.org where
you can download a free version of Gromacs under
the terms of the GNU General Public License (GPL) as published
by the Free Software Foundation; either version 2 of the License,
or (at your option) any later version.
[01:00:03] Protein: Protein in POPC
[01:00:03] Writing local files
starting mdrun 'Protein in POPC'
500000 steps, 1000.0 ps.
[01:00:03] Extra SSE boost OK.
[01:15:05] t triggered.
[01:16:27] Writing local files
[01:16:27] Completed 5000 out of 500000 steps (1 percent)
[01:30:49] Writing local files
[01:30:49] Completed 10000 out of 500000 steps (2 percent)
[01:43:55] Writing local files
[01:43:55] Completed 15000 out of 500000 steps (3 percent)
[01:57:23] Writing local files
[01:57:23] Completed 20000 out of 500000 steps (4 percent)
[02:11:15] Writing local files
[02:11:15] Completed 25000 out of 500000 steps (5 percent)
[02:25:17] Writing local files
[02:25:17] Completed 30000 out of 500000 steps (6 percent)
[02:38:55] Writing local files
[02:38:55] Completed 35000 out of 500000 steps (7 percent)
[02:52:59] Writing local files
[02:52:59] Completed 40000 out of 500000 steps (8 percent)
[03:06:45] Writing local files
[03:06:45] Completed 45000 out of 500000 steps (9 percent)
[03:20:34] Writing local files
[03:20:34] Completed 50000 out of 500000 steps (10 percent)
[03:34:24] Writing local files
[03:34:24] Completed 55000 out of 500000 steps (11 percent)
[03:48:23] Writing local files
[03:48:23] Completed 60000 out of 500000 steps (12 percent)
[04:02:20] Writing local files
[04:02:20] Completed 65000 out of 500000 steps (13 percent)
[04:15:50] Writing local files
[04:15:50] Completed 70000 out of 500000 steps (14 percent)
[04:29:08] Writing local files
[04:29:09] Completed 75000 out of 500000 steps (15 percent)
[04:42:28] Writing local files
[04:42:28] Completed 80000 out of 500000 steps (16 percent)
[04:56:19] Writing local files
[04:56:19] Completed 85000 out of 500000 steps (17 percent)
[05:10:18] Writing local files
[05:10:18] Completed 90000 out of 500000 steps (18 percent)
[05:24:10] Writing local files
[05:24:10] Completed 95000 out of 500000 steps (19 percent)
[05:37:11] Writing local files
[05:37:11] Completed 100000 out of 500000 steps (20 percent)
[05:51:20] Writing local files
[05:51:21] Completed 105000 out of 500000 steps (21 percent)
[06:04:11] Writing local files
[06:04:11] Completed 110000 out of 500000 steps (22 percent)
[06:17:45] Writing local files
[06:17:45] Completed 115000 out of 500000 steps (23 percent)
[06:30:42] Writing local files
[06:30:42] Completed 120000 out of 500000 steps (24 percent)
[06:42:50] Writing local files
[06:42:50] Completed 125000 out of 500000 steps (25 percent)
[06:55:58] - Autosending finished units... [February 18 06:55:58 UTC]
[06:55:58] Trying to send all finished work units
[06:55:58] + No unsent completed units remaining.
[06:55:58] - Autosend completed
[06:57:10] Writing local files
[06:57:10] Completed 130000 out of 500000 steps (26 percent)
[07:09:43] Writing local files
[07:09:43] Completed 135000 out of 500000 steps (27 percent)
[07:24:28] Writing local files
[07:24:28] Completed 140000 out of 500000 steps (28 percent)
[07:38:07] Writing local files
[07:38:07] Completed 145000 out of 500000 steps (29 percent)
[07:51:26] Writing local files
[07:51:26] Completed 150000 out of 500000 steps (30 percent)
[08:05:10] Writing local files
[08:05:10] Completed 155000 out of 500000 steps (31 percent)
[08:18:20] Writing local files
[08:18:21] Completed 160000 out of 500000 steps (32 percent)
[08:32:24] Writing local files
[08:32:24] Completed 165000 out of 500000 steps (33 percent)
[08:45:36] Writing local files
[08:45:36] Completed 170000 out of 500000 steps (34 percent)
[09:00:00] Writing local files
[09:00:00] Completed 175000 out of 500000 steps (35 percent)
[09:13:09] Writing local files
[09:13:09] Completed 180000 out of 500000 steps (36 percent)
[09:27:07] Writing local files
[09:27:07] Completed 185000 out of 500000 steps (37 percent)
[09:41:25] Writing local files
[09:41:25] Completed 190000 out of 500000 steps (38 percent)
[09:54:43] Writing local files
[09:54:43] Completed 195000 out of 500000 steps (39 percent)
[10:07:35] Writing local files
[10:07:35] Completed 200000 out of 500000 steps (40 percent)
[10:20:45] Writing local files
[10:20:45] Completed 205000 out of 500000 steps (41 percent)
[10:33:30] Writing local files
[10:33:30] Completed 210000 out of 500000 steps (42 percent)
[10:47:55] Writing local files
[10:47:55] Completed 215000 out of 500000 steps (43 percent)
[11:00:19] Writing local files
[11:00:19] Completed 220000 out of 500000 steps (44 percent)
[11:13:41] Writing local files
[11:13:41] Completed 225000 out of 500000 steps (45 percent)
[11:26:44] Writing local files
[11:26:45] Completed 230000 out of 500000 steps (46 percent)
[11:39:54] Writing local files
[11:39:54] Completed 235000 out of 500000 steps (47 percent)
[11:53:38] Writing local files
[11:53:38] Completed 240000 out of 500000 steps (48 percent)
[12:05:59] Writing local files
[12:05:59] Completed 245000 out of 500000 steps (49 percent)
[12:18:57] Writing local files
[12:18:57] Completed 250000 out of 500000 steps (50 percent)
[12:33:04] Writing local files
[12:33:04] Completed 255000 out of 500000 steps (51 percent)
[12:47:04] Writing local files
[12:47:04] Completed 260000 out of 500000 steps (52 percent)
[12:55:58] - Autosending finished units... [February 18 12:55:58 UTC]
[12:55:58] Trying to send all finished work units
[12:55:58] + No unsent completed units remaining.
[12:55:58] - Autosend completed
[13:00:55] Writing local files
[13:00:55] Completed 265000 out of 500000 steps (53 percent)
[13:14:01] Writing local files
[13:14:01] Completed 270000 out of 500000 steps (54 percent)
[13:28:24] Writing local files
[13:28:24] Completed 275000 out of 500000 steps (55 percent)
[13:41:51] Writing local files
[13:41:51] Completed 280000 out of 500000 steps (56 percent)
[13:55:15] Writing local files
[13:55:15] Completed 285000 out of 500000 steps (57 percent)
[14:08:53] Writing local files
[14:08:53] Completed 290000 out of 500000 steps (58 percent)
[14:22:13] Writing local files
[14:22:13] Completed 295000 out of 500000 steps (59 percent)
[14:35:44] Writing local files
[14:35:44] Completed 300000 out of 500000 steps (60 percent)
[14:49:30] Writing local files
[14:49:30] Completed 305000 out of 500000 steps (61 percent)
[15:02:21] Writing local files
[15:02:21] Completed 310000 out of 500000 steps (62 percent)
[15:15:27] Writing local files
[15:15:27] Completed 315000 out of 500000 steps (63 percent)
[15:28:44] Writing local files
[15:28:44] Completed 320000 out of 500000 steps (64 percent)
[15:42:16] Writing local files
[15:42:16] Completed 325000 out of 500000 steps (65 percent)
[15:56:18] Writing local files
[15:56:18] Completed 330000 out of 500000 steps (66 percent)
[16:08:19] Writing local files
[16:08:20] Completed 335000 out of 500000 steps (67 percent)
[16:21:14] Writing local files
[16:21:14] Completed 340000 out of 500000 steps (68 percent)
[16:34:00] Writing local files
[16:34:00] Completed 345000 out of 500000 steps (69 percent)
[16:48:03] Writing local files
[16:48:04] Completed 350000 out of 500000 steps (70 percent)
[17:01:24] Writing local files
[17:01:24] Completed 355000 out of 500000 steps (71 percent)
[17:14:51] Writing local files
[17:14:51] Completed 360000 out of 500000 steps (72 percent)
[17:28:03] Writing local files
[17:28:03] Completed 365000 out of 500000 steps (73 percent)
[17:42:02] Writing local files
[17:42:02] Completed 370000 out of 500000 steps (74 percent)
[17:55:23] Writing local files
[17:55:23] Completed 375000 out of 500000 steps (75 percent)
[18:09:52] Writing local files
[18:09:52] Completed 380000 out of 500000 steps (76 percent)
[18:23:40] Writing local files
[18:23:41] Completed 385000 out of 500000 steps (77 percent)
[18:38:40] Timered checkpoint triggered.
[18:38:41] Writing local files
[18:38:41] Completed 390000 out of 500000 steps (78 percent)
[18:52:52] Writing local files
[18:52:52] Completed 395000 out of 500000 steps (79 percent)
[18:55:58] - Autosending finished units... [February 18 18:55:58 UTC]
[18:55:58] Trying to send all finished work units
[18:55:58] + No unsent completed units remaining.
[18:55:58] - Autosend completed
[19:07:52] Timered checkpoint triggered.
[19:08:39] Writing local files
[19:08:39] Completed 400000 out of 500000 steps (80 percent)
[19:23:00] Writing local files
[19:23:00] Completed 405000 out of 500000 steps (81 percent)
[19:36:50] Writing local files
[19:36:50] Completed 410000 out of 500000 steps (82 percent)
[19:49:26] Writing local files
[19:49:26] Completed 415000 out of 500000 steps (83 percent)
[20:02:27] Writing local files
[20:02:27] Completed 420000 out of 500000 steps (84 percent)
[20:15:45] Writing local files
[20:15:45] Completed 425000 out of 500000 steps (85 percent)
[20:29:18] Writing local files
[20:29:18] Completed 430000 out of 500000 steps (86 percent)
[20:41:58] Writing local files
[20:41:58] Completed 435000 out of 500000 steps (87 percent)
[20:55:50] Writing local files
[20:55:50] Completed 440000 out of 500000 steps (88 percent)
[21:09:09] Writing local files
[21:09:09] Completed 445000 out of 500000 steps (89 percent)
[21:22:27] Writing local files
[21:22:27] Completed 450000 out of 500000 steps (90 percent)
[21:35:53] Writing local files
[21:35:53] Completed 455000 out of 500000 steps (91 percent)
[21:49:35] Writing local files
[21:49:36] Completed 460000 out of 500000 steps (92 percent)
[22:02:54] Writing local files
[22:02:54] Completed 465000 out of 500000 steps (93 percent)
[22:16:36] Writing local files
[22:16:36] Completed 470000 out of 500000 steps (94 percent)
[22:30:32] Writing local files
[22:30:32] Completed 475000 out of 500000 steps (95 percent)
[22:44:12] Writing local files
[22:44:12] Completed 480000 out of 500000 steps (96 percent)
[22:58:22] Writing local files
[22:58:22] Completed 485000 out of 500000 steps (97 percent)
[23:12:25] Writing local files
[23:12:25] Completed 490000 out of 500000 steps (98 percent)
[23:25:49] Writing local files
[23:25:49] Completed 495000 out of 500000 steps (99 percent)
[23:39:53] Writing local files
[23:39:53] Completed 500000 out of 500000 steps (100 percent)
M E G A - F L O P S A C C O U N T I N G
Parallel run - timing based on wallclock.
RF=Reaction-Field FE=Free Energy SCFE=Soft-Core/Free Energy
T=Tabulated W3=SPC/TIP3p W4=TIP4p (single or pairs)
NF=No Forces
Computing: M-Number M-Flops % of Flops
-----------------------------------------------------------------------
VdW(T) 1369160.269623 73934654.559642 16.7
RF Coul 549956.381592 18148560.592536 4.1
RF Coul [W3] 2419.090833 237070.901634 0.1
RF Coul + VdW(T) 620219.532729 40314269.627385 9.1
RF Coul + VdW(T) [W3] 287901.623417 37427211.044210 8.4
RF Coul + VdW(T) [W3-W3] 765752.119231 245040678.153920 55.2
Outer nonbonded loop 240261.876627 2402618.766270 0.5
1,4 nonbonded interactions 1099.502199 98955.197910 0.0
NS-Pairs 502428.260299 10550993.466279 2.4
Reset In Box 3882.477648 34942.298832 0.0
Shift-X 77548.155096 465288.930576 0.1
CG-CoM 1769.285385 51309.276165 0.0
Sum Forces 116472.232944 116472.232944 0.0
Bonds 13312.526625 572438.644875 0.1
Angles 15677.531355 2555437.610865 0.6
Propers 5397.010794 1235915.471826 0.3
Impropers 1010.002020 210080.420160 0.0
RB-Dihedrals 14209.028418 3509630.019246 0.8
Virial 38878.077756 699805.399608 0.2
Update 38824.077648 1203546.407088 0.3
Stop-CM 38824.000000 388240.000000 0.1
P-Coupling 38824.077648 232944.465888 0.1
Calc-Ekin 38824.155296 1048252.192992 0.2
Constraint-V 38824.077648 232944.465888 0.1
Constraint-Vir 25212.050424 605089.210176 0.1
Settle 8404.016808 2714497.428984 0.6
-----------------------------------------------------------------------
Total 444031846.785899 100.0
-----------------------------------------------------------------------
NODE (s) Real (s) (%)
Time: 81590.000 81590.000 100.0
22h39:50
(Mnbf/s) (GFlops) (ns/day) (hour/ns)
Performance: 44.067 5.442 1.059 22.664
[23:39:53] Writing final coordinates.
[23:39:53] Past main M.D. loop
[23:39:53] Will end MPI now
[23:40:53]
[23:40:53] Finished Work Unit:
[23:40:53] - Reading up to 3727344 from "work/wudata_01.arc": Read 3727344
[23:40:53] - Reading up to 1786196 from "work/wudata_01.xtc": Read 1786196
[23:40:53] goefile size: 0
[23:40:53] logfile size: 17507
[23:40:53] Leaving Run
[23:40:53] - Writing 5535447 bytes of core data to disk...
[23:40:54] ... Done.
[23:43:15] - Shutting down core
[23:43:15]
[23:43:15] Folding@home Core Shutdown: FINISHED_UNIT
[0]0:Return code = 0, signaled with Quit
[0]1:Return code = 18
[0]2:Return code = 0, signaled with Quit
[0]3:Return code = 0, signaled with Quit
[23:44:19] CoreStatus = 12 (18)
[23:44:19] Client-core communications error: ERROR 0x12
[23:44:19] Deleting current work unit & continuing...
[23:48:41] - Warning: Could not delete all work unit files (1): Core returned invalid code
[23:48:41] Trying to send all finished work units
[23:48:41] + No unsent completed units remaining.
[23:48:41] - Preparing to get new work unit...
[23:48:41] Cleaning up work directory
[23:48:41] + Attempting to get work packet
[23:48:41] Passkey found
[23:48:41] - Will indicate memory of 3962 MB
[23:48:41] - Connecting to assignment server
[23:48:41] Connecting to http://assign.stanford.edu:8080/
[23:49:21] - Could not CosmHTTPOpen
[23:49:21] + Could not connect to Assignment Server
[23:49:21] Connecting to http://assign2.stanford.edu:80/
[23:50:01] - Could not CosmHTTPOpen
[23:50:01] + Could not connect to Assignment Server 2
[23:50:01] + Couldn't get work instructions.
[23:50:01] - Attempt #1 to get work failed, and no other work to do.
Waiting before retry.
[23:50:17] + Attempting to get work packet
[23:50:17] Passkey found
[23:50:17] - Will indicate memory of 3962 MB
[23:50:17] - Connecting to assignment server
[23:50:17] Connecting to http://assign.stanford.edu:8080/
[23:50:58] - Could not CosmHTTPOpen
[23:50:58] + Could not connect to Assignment Server
[23:50:58] Connecting to http://assign2.stanford.edu:80/
[23:51:38] - Could not CosmHTTPOpen
[23:51:38] + Could not connect to Assignment Server 2
[23:51:38] + Couldn't get work instructions.
[23:51:38] - Attempt #2 to get work failed, and no other work to do.
Waiting before retry.
[23:52:01] + Attempting to get work packet
[23:52:01] Passkey found
[23:52:01] - Will indicate memory of 3962 MB
[23:52:01] - Connecting to assignment server
[23:52:01] Connecting to http://assign.stanford.edu:8080/
[23:52:41] - Could not CosmHTTPOpen
[23:52:41] + Could not connect to Assignment Server
[23:52:41] Connecting to http://assign2.stanford.edu:80/
[23:53:06] - Could not CosmHTTPOpen
[23:53:06] + Could not connect to Assignment Server 2
[23:53:06] + Couldn't get work instructions.
[23:53:06] - Attempt #3 to get work failed, and no other work to do.
Waiting before retry.
[23:53:40] + Attempting to get work packet
[23:53:40] Passkey found
[23:53:40] - Will indicate memory of 3962 MB
[23:53:40] - Connecting to assignment server
[23:53:40] Connecting to http://assign.stanford.edu:8080/
[23:53:40] - Could not CosmHTTPOpen
[23:53:40] + Could not connect to Assignment Server
[23:53:40] Connecting to http://assign2.stanford.edu:80/
[23:53:40] - Could not CosmHTTPOpen
[23:53:40] + Could not connect to Assignment Server 2
[23:53:40] + Couldn't get work instructions.
[23:53:40] - Attempt #4 to get work failed, and no other work to do.
Waiting before retry.
[23:54:22] + Attempting to get work packet
[23:54:22] Passkey found
[23:54:22] - Will indicate memory of 3962 MB
[23:54:22] - Connecting to assignment server
[23:54:22] Connecting to http://assign.stanford.edu:8080/
[23:54:22] - Could not CosmHTTPOpen
[23:54:22] + Could not connect to Assignment Server
[23:54:22] Connecting to http://assign2.stanford.edu:80/
[23:54:27] - Could not CosmHTTPOpen
[23:54:27] + Could not connect to Assignment Server 2
[23:54:27] + Couldn't get work instructions.
[23:54:27] - Attempt #5 to get work failed, and no other work to do.
Waiting before retry.
[23:55:57] + Attempting to get work packet
[23:55:57] Passkey found
[23:55:57] - Will indicate memory of 3962 MB
[23:55:57] - Connecting to assignment server
[23:55:57] Connecting to http://assign.stanford.edu:8080/
[23:55:57] - Could not CosmHTTPOpen
[23:55:57] + Could not connect to Assignment Server
[23:55:57] Connecting to http://assign2.stanford.edu:80/
[23:56:07] - Could not CosmHTTPOpen
[23:56:07] + Could not connect to Assignment Server 2
[23:56:07] + Couldn't get work instructions.
[23:56:07] - Attempt #6 to get work failed, and no other work to do.
Waiting before retry.
[23:58:49] + Attempting to get work packet
[23:58:49] Passkey found
[23:58:49] - Will indicate memory of 3962 MB
[23:58:49] - Connecting to assignment server
[23:58:49] Connecting to http://assign.stanford.edu:8080/
[23:59:09] - Could not CosmHTTPOpen
[23:59:09] + Could not connect to Assignment Server
[23:59:09] Connecting to http://assign2.stanford.edu:80/
[23:59:24] - Could not CosmHTTPOpen
[23:59:24] + Could not connect to Assignment Server 2
[23:59:24] + Couldn't get work instructions.
[23:59:24] - Attempt #7 to get work failed, and no other work to do.
Waiting before retry.
[00:04:57] + Attempting to get work packet
[00:04:57] Passkey found
[00:04:57] - Will indicate memory of 3962 MB
[00:04:57] - Connecting to assignment server
[00:04:57] Connecting to http://assign.stanford.edu:8080/
[00:05:12] - Could not CosmHTTPOpen
[00:05:12] + Could not connect to Assignment Server
[00:05:12] Connecting to http://assign2.stanford.edu:80/
[00:05:22] - Could not CosmHTTPOpen
[00:05:22] + Could not connect to Assignment Server 2
[00:05:22] + Couldn't get work instructions.
[00:05:22] - Attempt #8 to get work failed, and no other work to do.
Waiting before retry.
[00:16:12] + Attempting to get work packet
[00:16:12] Passkey found
[00:16:12] - Will indicate memory of 3962 MB
[00:16:12] - Connecting to assignment server
[00:16:12] Connecting to http://assign.stanford.edu:8080/
[00:16:33] - Could not CosmHTTPOpen
[00:16:33] + Could not connect to Assignment Server
[00:16:33] Connecting to http://assign2.stanford.edu:80/
[00:16:43] - Could not CosmHTTPOpen
[00:16:43] + Could not connect to Assignment Server 2
[00:16:43] + Couldn't get work instructions.
[00:16:43] - Attempt #9 to get work failed, and no other work to do.
Waiting before retry.
[00:38:15] + Attempting to get work packet
[00:38:15] Passkey found
[00:38:15] - Will indicate memory of 3962 MB
[00:38:15] - Connecting to assignment server
[00:38:15] Connecting to http://assign.stanford.edu:8080/
[00:38:41] - Could not CosmHTTPOpen
[00:38:41] + Could not connect to Assignment Server
[00:38:41] Connecting to http://assign2.stanford.edu:80/
[00:39:02] - Could not CosmHTTPOpen
[00:39:02] + Could not connect to Assignment Server 2
[00:39:02] + Couldn't get work instructions.
[00:39:02] - Attempt #10 to get work failed, and no other work to do.
Waiting before retry.
[00:55:59] - Autosending finished units... [February 19 00:55:59 UTC]
[00:55:59] Trying to send all finished work units
[00:55:59] + No unsent completed units remaining.
[00:55:59] - Autosend completed
^C[01:07:52] ***** Got an Activate signal (2)
[01:07:52] Killing all core threads
Folding@Home Client Shutdown.
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah# ./fah
Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.
4 cores detected
--- Opening Log file [February 19 01:08:01 UTC]
# Linux SMP Console Edition ###################################################
###############################################################################
Folding@Home Client Version 6.29
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /home/fah
Executable: ./fah6
Arguments: -smp 4 -verbosity 9
[01:08:01] - Ask before connecting: No
[01:08:01] - User name: Mr_ThunderFrog (Team 170070)
[01:08:01] - User ID: 255F603D6D035F9E
[01:08:01] - Machine ID: 1
[01:08:01]
[01:08:01] Loaded queue successfully.
[Feb08:01] - Preparing to get new work unit...
[01:08:01] - Autosending finished units... [Feb08:01]19 01:08:01 UTC]
[01:08:01] Cleaning up work directory
[01:08:01] Trying to send all finished work units
[01:08:01] + No unsent completed units remaining.
[01:08:01] - Autosend completed
[01:08:01] + Attempting to get work packet
[01:08:01] Passkey found
[01:08:01] - Will indicate memory of 3962 MB
[01:08:01] - Connecting to assignment server
[01:08:01] Connecting to http://assign.stanford.edu:8080/
[01:08:41] - Could not CosmHTTPOpen
[01:08:41] + Could not connect to Assignment Server
[01:08:41] Connecting to http://assign2.stanford.edu:80/
[01:09:21] - Could not CosmHTTPOpen
[01:09:21] + Could not connect to Assignment Server 2
[01:09:21] + Couldn't get work instructions.
[01:09:21] - Attempt #1 to get work failed, and no other work to do.
Waiting before retry.
[01:09:39] + Attempting to get work packet
[01:09:39] Passkey found
[01:09:39] - Will indicate memory of 3962 MB
[01:09:39] - Connecting to assignment server
[01:09:39] Connecting to http://assign.stanford.edu:8080/
[01:10:19] - Could not CosmHTTPOpen
[01:10:19] + Could not connect to Assignment Server
[01:10:19] Connecting to http://assign2.stanford.edu:80/
[01:11:11] - Could not CosmHTTPOpen
[01:11:11] + Could not connect to Assignment Server 2
[01:11:11] + Couldn't get work instructions.
[01:11:11] - Attempt #2 to get work failed, and no other work to do.
Waiting before retry.
[01:11:23] + Attempting to get work packet
[01:11:23] Passkey found
[01:11:23] - Will indicate memory of 3962 MB
[01:11:23] - Connecting to assignment server
[01:11:23] Connecting to http://assign.stanford.edu:8080/
[01:12:03] - Could not CosmHTTPOpen
[01:12:03] + Could not connect to Assignment Server
[01:12:03] Connecting to http://assign2.stanford.edu:80/
[01:12:43] - Could not CosmHTTPOpen
[01:12:43] + Could not connect to Assignment Server 2
[01:12:43] + Couldn't get work instructions.
[01:12:43] - Attempt #3 to get work failed, and no other work to do.
Waiting before retry.
[01:13:14] + Attempting to get work packet
[01:13:14] Passkey found
[01:13:14] - Will indicate memory of 3962 MB
[01:13:14] - Connecting to assignment server
[01:13:14] Connecting to http://assign.stanford.edu:8080/
[01:13:54] - Could not CosmHTTPOpen
[01:13:54] + Could not connect to Assignment Server
[01:13:54] Connecting to http://assign2.stanford.edu:80/
[01:14:34] - Could not CosmHTTPOpen
[01:14:34] + Could not connect to Assignment Server 2
[01:14:34] + Couldn't get work instructions.
[01:14:34] - Attempt #4 to get work failed, and no other work to do.
Waiting before retry.
[01:15:19] + Attempting to get work packet
[01:15:19] Passkey found
[01:15:19] - Will indicate memory of 3962 MB
[01:15:19] - Connecting to assignment server
[01:15:19] Connecting to http://assign.stanford.edu:8080/
[01:15:19] - Could not CosmHTTPOpen
[01:15:19] + Could not connect to Assignment Server
[01:15:19] Connecting to http://assign2.stanford.edu:80/
[01:15:19] - Could not CosmHTTPOpen
[01:15:19] + Could not connect to Assignment Server 2
[01:15:19] + Couldn't get work instructions.
[01:15:19] - Attempt #5 to get work failed, and no other work to do.
Waiting before retry.
[01:16:45] + Attempting to get work packet
[01:16:45] Passkey found
[01:16:45] - Will indicate memory of 3962 MB
[01:16:45] - Connecting to assignment server
[01:16:45] Connecting to http://assign.stanford.edu:8080/
[01:16:45] - Could not CosmHTTPOpen
[01:16:45] + Could not connect to Assignment Server
[01:16:45] Connecting to http://assign2.stanford.edu:80/
[01:16:45] - Could not CosmHTTPOpen
[01:16:45] + Could not connect to Assignment Server 2
[01:16:45] + Couldn't get work instructions.
[01:16:45] - Attempt #6 to get work failed, and no other work to do.
Waiting before retry.
[01:19:27] + Attempting to get work packet
[01:19:27] Passkey found
[01:19:27] - Will indicate memory of 3962 MB
[01:19:27] - Connecting to assignment server
[01:19:27] Connecting to http://assign.stanford.edu:8080/
[01:19:27] - Could not CosmHTTPOpen
[01:19:27] + Could not connect to Assignment Server
[01:19:27] Connecting to http://assign2.stanford.edu:80/
[01:19:27] - Could not CosmHTTPOpen
[01:19:27] + Could not connect to Assignment Server 2
[01:19:27] + Couldn't get work instructions.
[01:19:27] - Attempt #7 to get work failed, and no other work to do.
Waiting before retry.
[01:24:57] + Attempting to get work packet
[01:24:57] Passkey found
[01:24:57] - Will indicate memory of 3962 MB
[01:24:57] - Connecting to assignment server
[01:24:57] Connecting to http://assign.stanford.edu:8080/
[01:24:57] - Could not CosmHTTPOpen
[01:24:57] + Could not connect to Assignment Server
[01:24:57] Connecting to http://assign2.stanford.edu:80/
[01:24:57] - Could not CosmHTTPOpen
[01:24:57] + Could not connect to Assignment Server 2
[01:24:57] + Couldn't get work instructions.
[01:24:57] - Attempt #8 to get work failed, and no other work to do.
Waiting before retry.
^C[01:32:35] ***** Got an Activate signal (2)
[01:32:36] Killing all core threads
Folding@Home Client Shutdown.
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah#
root@mozart:/home/fah# ./fah
Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.
4 cores detected
--- Opening Log file [February 19 01:32:42 UTC]
# Linux SMP Console Edition ###################################################
###############################################################################
Folding@Home Client Version 6.29
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /home/fah
Executable: ./fah6
Arguments: -smp 4 -verbosity 9
[01:32:42] - Ask before connecting: No
[01:32:42] - User name: Mr_ThunderFrog (Team 170070)
[01:32:42] - User ID: 255F603D6D035F9E
[01:32:42] - Machine ID: 1
[01:32:42]
[01:32:42] Loaded queue successfully.
[01:32:42] - Preparing to get new work unit...
[01:32:42] - Autosending finished units... [February 19 01:32:42 UTC]
[01:32:42] Cleaning up work directory
[01:32:42] Trying to send all finished work units
[01:32:42] + Attempting to get work packet
[01:32:42] Passkey found
[01:32:42] - Will indicate memory of 3962 MB
[01:32:42] - Connecting to assignment server
[01:32:42] Connecting to http://assign.stanford.edu:8080/
[01:32:42] + No unsent completed units remaining.
[01:32:42] - Autosend completed
[01:32:46] Posted data.
[01:32:46] Initial: 40AB; - Successful: assigned to (171.64.65.63).
[01:32:46] + News From Folding@Home: Welcome to Folding@Home
[01:32:46] Loaded queue successfully.
[01:32:46] Connecting to http://171.64.65.63:8080/
[01:32:49] Posted data.
[01:32:49] Initial: 0000; - Receiving payload (expected size: 1656016)
[01:33:03] - Downloaded at ~115 kB/s
[01:33:03] - Averaged speed for that direction ~67 kB/s
[01:33:03] + Received work.
[01:33:03] + Closed connections
[01:33:03]
[01:33:03] + Processing work unit
[01:33:03] Work type a1 not eligible for variable processors
[01:33:03] Core required: FahCore_a1.exe
[01:33:03] Core found.
[01:33:03] Working on queue slot 02 [February 19 01:33:03 UTC]
[01:33:03] + Working ...
[01:33:03] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work/ -nice 19 -suffix 02 -checkpoint 15 -verbose -lifeline 5001 -version 629'
[01:33:03]
[01:33:03] *------------------------------*
[01:33:03] Folding@Home Gromacs SMP Core
[01:33:03] Version 1.74 (November 27, 2006)
[01:33:03]
[01:33:03] Preparing to commence simulation
[01:33:03] - Ensuring status. Please wait.
[01:33:20] - Looking at optimizations...
[01:33:20] - Working with standard loops on this execution.
[01:33:20] - Previous termination of core was improper.
[01:33:20] - Going to use standard loops.
[01:33:20] - Files status OK
[01:33:20] tarting from initial work pa- Starting from initial work packet
[01:33:20]
[01:33:20] Project: 30Entering M.D.
[01:33:20] ne 363, Gen 28)
[01:33:20]
[01:33:20] Entering M.D.
[01:33:21] ne 363, Gen 28)
[01:33:21]
[01:33:21] Entering M.D.
NNODES=4, MYRANK=0, HOSTNAME=mozart
NNODES=4, MYRANK=1, HOSTNAME=mozart
NNODES=4, MYRANK=3, HOSTNAME=mozart
NNODES=4, MYRANK=2, HOSTNAME=mozart
NODEID=0 argc=15
NODEID=3 argc=15
NODEID=2 argc=15
NODEID=1 argc=15
Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2004, The GROMACS development team,
check out http://www.gromacs.org for more information.
This inclusion of Gromacs code in the Folding@Home Core is under
a special license (see http://folding.stanford.edu/gromacs.html)
specially granted to Stanford by the copyright holders. If you
are interested in using Gromacs, visit www.gromacs.org where
you can download a free version of Gromacs under
the terms of the GNU General Public License (GPL) as published
by the Free Software Foundation; either version 2 of the License,
or (at your option) any later version.
starting mdrun '66728 p3065_lambda5_99sb_big'
2500000 steps, 5000.0 ps.
[01:33:27] ting local files
[01:33:27] Extra SSE boost OK.
[01:33:27] Writing local files
[01:33:27] Completed 0 out of 2500000 steps (0 percent)
[01:48:27] Timered checkpoint triggered.
[02:00:29] Writing local files
[02:00:29] Completed 25000 out of 2500000 steps (1 percent)
[02:15:29] Timered checkpoint triggered.
[02:26:50] Writing local files
[02:26:50] Completed 50000 out of 2500000 steps (2 percent)
[02:41:50] Timered checkpoint triggered.
[02:51:57] Writing local files
[02:51:57] Completed 75000 out of 2500000 steps (3 percent)
[03:06:58] Timered checkpoint triggered.
[03:18:15] Writing local files
[03:18:15] Completed 100000 out of 2500000 steps (4 percent)
[03:33:15] Timered checkpoint triggered.
[03:43:45] Writing local files
[03:43:45] Completed 125000 out of 2500000 steps (5 percent)
[03:58:46] Timered checkpoint triggered.
[04:07:49] Writing local files
[04:07:49] Completed 150000 out of 2500000 steps (6 percent)
[04:22:50] Timered checkpoint triggered.
[04:32:07] Writing local files
[04:32:07] Completed 175000 out of 2500000 steps (7 percent)
[04:47:07] Timered checkpoint triggered.
[04:56:45] Writing local files
[04:56:46] Completed 200000 out of 2500000 steps (8 percent)
[05:11:46] Timered checkpoint triggered.
[05:21:26] Writing local files
[05:21:26] Completed 225000 out of 2500000 steps (9 percent)
[05:36:26] Timered checkpoint triggered.
[05:45:44] Writing local files
[05:45:44] Completed 250000 out of 2500000 steps (10 percent)
[06:00:44] Timered checkpoint triggered.
[06:09:28] Writing local files