5101 run 0 clone 76 gen 105 running very slow
Posted: Wed Aug 12, 2009 4:03 pm
getting 33 min frame times, this rig { C2D E6400 W 2 G ram } usually sees 12 min frame times for SMP Wu's
are these times reasonable for this wu?
Code: Select all
08:47:17] Project: 5101 (Run 0, Clone 76, Gen 105)
[08:47:17]
[08:47:17] Entering M.D.
NNODES=4, MYRANK=0, HOSTNAME=Grendel
NNODES=4, MYRANK=1, HOSTNAME=Grendel
NNODES=4, MYRANK=2, HOSTNAME=Grendel
NNODES=4, MYRANK=3, HOSTNAME=Grendel
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NODEID=0 argc=15
NODEID=1 argc=15
NODEID=2 argc=15
NODEID=3 argc=15
starting mdrun 'CMF in water'
2000000 steps, 4000.0 ps.
[08:47:23] Extra SSE boost OK.
[08:47:23] r
[08:47:23] Writing local files
[08:47:23] Extra SSE boost OK.
[08:47:23] 0000 steps (0 percent)
[09:02:23] Timered checkpoint triggered.
[09:17:23] Timered checkpoint triggered.
[09:20:25] Writing local files
[09:20:25] Completed 20000 out of 2000000 steps (1 percent)
[09:35:24] Timered checkpoint triggered.
[09:50:24] Timered checkpoint triggered.
[09:53:27] Writing local files
[09:53:27] Completed 40000 out of 2000000 steps (2 percent)
[09:59:16] - Autosending finished units... [August 12 09:59:16 UTC]
[09:59:16] Trying to send all finished work units
[09:59:16] + No unsent completed units remaining.
[09:59:16] - Autosend completed
[10:08:27] Timered checkpoint triggered.
[10:23:27] Timered checkpoint triggered.
[10:26:32] Writing local files
[10:26:32] Completed 60000 out of 2000000 steps (3 percent)
[10:41:32] Timered checkpoint triggered.
[10:56:32] Timered checkpoint triggered.
[10:59:29] Writing local files
[10:59:29] Completed 80000 out of 2000000 steps (4 percent)
[11:14:29] Timered checkpoint triggered.
[11:29:29] Timered checkpoint triggered.
[11:32:21] Writing local files
[11:32:21] Completed 100000 out of 2000000 steps (5 percent)
[11:47:21] Timered checkpoint triggered.
[12:02:21] Timered checkpoint triggered.
[12:05:14] Writing local files
[12:05:14] Completed 120000 out of 2000000 steps (6 percent)
[12:20:13] Timered checkpoint triggered.
[12:35:13] Timered checkpoint triggered.
[12:38:06] Writing local files
[12:38:06] Completed 140000 out of 2000000 steps (7 percent)
[12:53:06] Timered checkpoint triggered.
[13:08:06] Timered checkpoint triggered.
[13:10:51] Writing local files
[13:10:52] Completed 160000 out of 2000000 steps (8 percent)
[13:25:51] Timered checkpoint triggered.
[13:40:51] Timered checkpoint triggered.
[13:43:30] Writing local files
[13:43:30] Completed 180000 out of 2000000 steps (9 percent)
[13:58:30] Timered checkpoint triggered.
[14:13:30] Timered checkpoint triggered.
[14:15:56] Writing local files
[14:15:56] Completed 200000 out of 2000000 steps (10 percent)
[14:30:56] Timered checkpoint triggered.
[14:45:56] Timered checkpoint triggered.
[14:48:11] Writing local files
[14:48:11] Completed 220000 out of 2000000 steps (11 percent)
[15:03:11] Timered checkpoint triggered.
[15:18:11] Timered checkpoint triggered.
[15:20:45] Writing local files
[15:20:45] Completed 240000 out of 2000000 steps (12 percent)