Project 10001, Run 533, Clone 1, Gen 8 - EUE - ERROR 0x0

[djchandler]

10001 (Run 533, Clone 1, Gen 8)

This is new. First time for an EUE on my Mythbuntu 9.10 server. Got this same WU twice before getting re-assigned after 23 frames in both instances. In neither case was any other CPU intensive task being performed. Nearly 100% cpu usage allocated to Core B4.

This latest build (1747) of Core B4 not doing so well perhaps. Looks like maybe exactly the same thing happened twice. Any chance a different C++ compiler could be used, such as GNU C++ compiler (g++ 4.4.1) exclusively. Current Ubuntu distribution is up 4.4.1. ProtoMol Core B4 is shown as g++ 4.1, which may have bugs that have been fixed since. Compiling machine running out-of-date Linux kernel as well.

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[18:43:25] *********************** Log Started 24/Dec/2009 18:43:25 ***********************
[18:43:25] ************************** ProtoMol Folding@Home Core **************************
[18:43:25]   Version: 20
[18:43:25]      Type: 180
[18:43:25]      Core: ProtoMol
[18:43:25]   Website: http://folding.stanford.edu/
[18:43:25] Copyright: (c) 2009 Stanford University
[18:43:25]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[18:43:25]      Args: -dir work/ -suffix 05 -checkpoint 15 -lifeline 2168 -version 602
[18:43:25] ************************************ Build *************************************
[18:43:25]      Date: Dec 19 2009
[18:43:25]      Time: 18:25:17
[18:43:25]  Revision: 1747
[18:43:25]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[18:43:25]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[18:43:25]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[18:43:25]  Platform: Linux 2.4.27-3-386
[18:43:25]      Bits: 32
[18:43:25] ************************************ System ************************************
[18:43:25]        OS: Linux 2.6.31-16-generic i686
[18:43:25]       CPU: AMD Athlon(tm) 64 Processor 3400+
[18:43:25]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[18:43:25]      CPUs: 1 Logical, 1 Physical
[18:43:25]    Memory: 1.97 GB
[18:43:25] ********************************************************************************
[18:43:25] Project: 10001 (Run 533, Clone 1, Gen 8)
[18:43:25] Reading tar file par_all27_prot_lipid.inp
[18:43:25] Reading tar file scpismQuartic.inp
[18:43:25] Reading tar file ww_exteq_nowater1.pdb
[18:43:25] Reading tar file ww_exteq_nowater1.psf
[18:43:25] Reading tar file checkpt
[18:43:25] Reading tar file ww_exteq_nowater1.189.pos
[18:43:25] Reading tar file ww_exteq_nowater1.189.vel
[18:43:25] Reading tar file protomol.conf
[18:43:25] Reading tar file core.xml
[18:43:25] Digital signatures verified
[18:43:25] Completed 0 out of 200000 steps (0%)
[18:47:23] Completed 2000 out of 200000 steps (1%)
[18:51:26] Completed 4000 out of 200000 steps (2%)
[18:55:30] Completed 6000 out of 200000 steps (3%)
[18:59:21] Completed 8000 out of 200000 steps (4%)
[19:03:38] Completed 10000 out of 200000 steps (5%)
[19:07:42] Completed 12000 out of 200000 steps (6%)
[19:11:36] Completed 14000 out of 200000 steps (7%)
[19:15:30] Completed 16000 out of 200000 steps (8%)
[19:19:36] Completed 18000 out of 200000 steps (9%)
[19:23:33] Completed 20000 out of 200000 steps (10%)
[19:27:30] Completed 22000 out of 200000 steps (11%)
[19:31:25] Completed 24000 out of 200000 steps (12%)
[19:35:18] Completed 26000 out of 200000 steps (13%)
[19:39:24] Completed 28000 out of 200000 steps (14%)
[19:43:42] Completed 30000 out of 200000 steps (15%)
[19:47:53] Completed 32000 out of 200000 steps (16%)
[19:51:55] Completed 34000 out of 200000 steps (17%)
[19:56:10] Completed 36000 out of 200000 steps (18%)
[20:00:37] Completed 38000 out of 200000 steps (19%)
[20:04:38] Completed 40000 out of 200000 steps (20%)
[20:08:31] Completed 42000 out of 200000 steps (21%)
[20:12:41] Completed 44000 out of 200000 steps (22%)
[20:16:55] Completed 46000 out of 200000 steps (23%)
[20:18:55] CoreStatus = 0 (0)
[20:18:55] Client-core communications error: ERROR 0x0
[20:18:55] Deleting current work unit & continuing...
<snip>...
[20:24:59] *********************** Log Started 24/Dec/2009 20:24:59 ***********************
[20:24:59] ************************** ProtoMol Folding@Home Core **************************
[20:24:59]   Version: 20
[20:24:59]      Type: 180
[20:24:59]      Core: ProtoMol
[20:24:59]   Website: http://folding.stanford.edu/
[20:24:59] Copyright: (c) 2009 Stanford University
[20:24:59]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[20:24:59]      Args: -dir work/ -suffix 06 -checkpoint 15 -lifeline 2168 -version 602
[20:24:59] ************************************ Build *************************************
[20:24:59]      Date: Dec 19 2009
[20:24:59]      Time: 18:25:17
[20:24:59]  Revision: 1747
[20:24:59]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[20:24:59]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[20:24:59]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[20:24:59]  Platform: Linux 2.4.27-3-386
[20:24:59]      Bits: 32
[20:24:59] ************************************ System ************************************
[20:24:59]        OS: Linux 2.6.31-16-generic i686
[20:24:59]       CPU: AMD Athlon(tm) 64 Processor 3400+
[20:24:59]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[20:24:59]      CPUs: 1 Logical, 1 Physical
[20:24:59]    Memory: 1.97 GB
[20:24:59] ********************************************************************************
[20:24:59] Project: 10001 (Run 533, Clone 1, Gen 8)
[20:24:59] Reading tar file par_all27_prot_lipid.inp
[20:24:59] Reading tar file scpismQuartic.inp
[20:24:59] Reading tar file ww_exteq_nowater1.pdb
[20:24:59] Reading tar file ww_exteq_nowater1.psf
[20:24:59] Reading tar file checkpt
[20:24:59] Reading tar file ww_exteq_nowater1.189.pos
[20:24:59] Reading tar file ww_exteq_nowater1.189.vel
[20:24:59] Reading tar file protomol.conf
[20:24:59] Reading tar file core.xml
[20:24:59] Digital signatures verified
[20:25:00] Completed 0 out of 200000 steps (0%)
[20:28:57] Completed 2000 out of 200000 steps (1%)
[20:33:00] Completed 4000 out of 200000 steps (2%)
[20:37:04] Completed 6000 out of 200000 steps (3%)
[20:40:54] Completed 8000 out of 200000 steps (4%)
[20:45:12] Completed 10000 out of 200000 steps (5%)
[20:49:15] Completed 12000 out of 200000 steps (6%)
[20:53:09] Completed 14000 out of 200000 steps (7%)
[20:57:04] Completed 16000 out of 200000 steps (8%)
[21:01:09] Completed 18000 out of 200000 steps (9%)
[21:05:06] Completed 20000 out of 200000 steps (10%)
[21:09:02] Completed 22000 out of 200000 steps (11%)
[21:12:58] Completed 24000 out of 200000 steps (12%)
[21:16:50] Completed 26000 out of 200000 steps (13%)
[21:20:56] Completed 28000 out of 200000 steps (14%)
[21:25:14] Completed 30000 out of 200000 steps (15%)
[21:29:25] Completed 32000 out of 200000 steps (16%)
[21:33:26] Completed 34000 out of 200000 steps (17%)
[21:37:42] Completed 36000 out of 200000 steps (18%)
[21:42:09] Completed 38000 out of 200000 steps (19%)
[21:46:10] Completed 40000 out of 200000 steps (20%)
[21:50:02] Completed 42000 out of 200000 steps (21%)
[21:54:12] Completed 44000 out of 200000 steps (22%)
[21:58:26] Completed 46000 out of 200000 steps (23%)
[22:00:29] CoreStatus = 0 (0)
[22:00:29] Client-core communications error: ERROR 0x0
[22:00:29] Deleting current work unit & continuing...

[toTOW]

Joe released v21 of the core ... it might help with this issue too.

[djchandler]

New version (build 1748) halting at the same point, different error code (ERROR 0x8b) but still a client-core communication failure on this WU. Is it the WU itself?

How about it being a problem due to disparity in kernel versions? Maybe I need another library installed.

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[23:55:44] Decompressed FahCore_b4.exe (21549840 bytes) successfully
[23:55:44] + Core successfully engaged
[23:55:49] 
[23:55:49] + Processing work unit
[23:55:49] Core required: FahCore_b4.exe
[23:55:49] Core found.
[23:55:49] Working on Unit 08 [December 25 23:55:49]
[23:55:49] + Working ...
[23:55:49] *********************** Log Started 25/Dec/2009 23:55:49 ***********************
[23:55:49] ************************** ProtoMol Folding@Home Core **************************
[23:55:49]   Version: 21
[23:55:49]      Type: 180
[23:55:49]      Core: ProtoMol
[23:55:49]   Website: http://folding.stanford.edu/
[23:55:49] Copyright: (c) 2009 Stanford University
[23:55:49]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[23:55:49]      Args: -dir work/ -suffix 08 -checkpoint 15 -lifeline 2168 -version 602
[23:55:49] ************************************ Build *************************************
[23:55:49]      Date: Dec 24 2009
[23:55:49]      Time: 06:37:42
[23:55:49]  Revision: 1748
[23:55:49]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[23:55:49]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[23:55:49]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[23:55:49]  Platform: Linux 2.4.27-3-386
[23:55:49]      Bits: 32
[23:55:49] ************************************ System ************************************
[23:55:49]        OS: Linux 2.6.31-16-generic i686
[23:55:49]       CPU: AMD Athlon(tm) 64 Processor 3400+
[23:55:49]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[23:55:49]      CPUs: 1 Logical, 1 Physical
[23:55:49]    Memory: 1.97 GB
[23:55:49] ********************************************************************************
[23:55:49] Project: 10001 (Run 533, Clone 1, Gen 8)
[23:55:49] Reading tar file par_all27_prot_lipid.inp
[23:55:49] Reading tar file scpismQuartic.inp
[23:55:49] Reading tar file ww_exteq_nowater1.pdb
[23:55:49] Reading tar file ww_exteq_nowater1.psf
[23:55:49] Reading tar file checkpt
[23:55:49] Reading tar file ww_exteq_nowater1.189.pos
[23:55:49] Reading tar file ww_exteq_nowater1.189.vel
[23:55:49] Reading tar file protomol.conf
[23:55:49] Reading tar file core.xml
[23:55:49] Digital signatures verified
[23:55:50] Completed 0 out of 200000 steps (0%)
[23:59:49] Completed 2000 out of 200000 steps (1%)
[00:03:54] Completed 4000 out of 200000 steps (2%)
[00:07:59] Completed 6000 out of 200000 steps (3%)
[00:11:52] Completed 8000 out of 200000 steps (4%)
[00:16:11] Completed 10000 out of 200000 steps (5%)
[00:20:16] Completed 12000 out of 200000 steps (6%)
[00:24:12] Completed 14000 out of 200000 steps (7%)
[00:28:08] Completed 16000 out of 200000 steps (8%)
[00:32:15] Completed 18000 out of 200000 steps (9%)
[00:36:13] Completed 20000 out of 200000 steps (10%)
[00:40:12] Completed 22000 out of 200000 steps (11%)
[00:44:08] Completed 24000 out of 200000 steps (12%)
[00:48:03] Completed 26000 out of 200000 steps (13%)
[00:52:10] Completed 28000 out of 200000 steps (14%)
[00:56:30] Completed 30000 out of 200000 steps (15%)
[01:00:42] Completed 32000 out of 200000 steps (16%)
[01:04:46] Completed 34000 out of 200000 steps (17%)
[01:09:04] Completed 36000 out of 200000 steps (18%)
[01:13:32] Completed 38000 out of 200000 steps (19%)
[01:17:35] Completed 40000 out of 200000 steps (20%)
[01:21:30] Completed 42000 out of 200000 steps (21%)
[01:25:42] Completed 44000 out of 200000 steps (22%)
[01:29:57] Completed 46000 out of 200000 steps (23%)
[01:32:04] CoreStatus = 8B (139)
[01:32:04] Client-core communications error: ERROR 0x8b
[01:32:04] Deleting current work unit & continuing...

[djchandler]

Is sending me the same WU 10 times in a row resulting in EUE normal procedure? Thats 10 times in a row now with build 1748, not counting the two reported in the OP with build 1747. That's 12 x 94 minutes each to get 12 EUE results. Not to put too fine a point on it, thats almost 19 hours of a CPU running 100% for nil results. This last set of 10 was 17 hours, 30 minutes and 36 seconds including 4 separate downloads of build 1748 of FahCore_b4.exe. I see no signs of corruption on my end. Why all the repeated attempts? It's my understanding that 3 failed attempts gets a reassignment.

This is on my Mythbuntu 9.10 (32-bit) backend. Nothing else was running but F@H even though the backend was active. There were no recordings, EPG database updates or any post-recording processing going on during this time. This sytem is not giving me any other problems except for the frontend welcome routine hanging, which has not caused any cascading failures. Usually I don't run the frontend on this box. There is mysql and Apache server giving me intranet access to the frontend even if the frontend isn't locally resident in memory.

Can't five you the whole FAHlog excerpt in one post. Breaking it up into two additional posts to follow.

[djchandler]

FAHlog part one covering 10 consecutive assignment period.

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[01:32:05] - Preparing to get new work unit...
[01:32:05] + Attempting to get work packet
[01:32:05] - Connecting to assignment server
[01:32:05] - Successful: assigned to (129.74.85.48).
[01:32:05] + News From Folding@Home: Welcome to Folding@Home
[01:32:06] Loaded queue successfully.
[01:32:07] + Closed connections
[01:32:12] 
[01:32:12] + Processing work unit
[01:32:12] Core required: FahCore_b4.exe
[01:32:12] Core found.
[01:32:12] Working on Unit 09 [December 26 01:32:12]
[01:32:12] + Working ...
[01:32:12] *********************** Log Started 26/Dec/2009 01:32:12 ***********************
[01:32:12] ************************** ProtoMol Folding@Home Core **************************
[01:32:12]   Version: 21
[01:32:12]      Type: 180
[01:32:12]      Core: ProtoMol
[01:32:12]   Website: http://folding.stanford.edu/
[01:32:12] Copyright: (c) 2009 Stanford University
[01:32:12]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[01:32:12]      Args: -dir work/ -suffix 09 -checkpoint 15 -lifeline 2168 -version 602
[01:32:12] ************************************ Build *************************************
[01:32:12]      Date: Dec 24 2009
[01:32:12]      Time: 06:37:42
[01:32:12]  Revision: 1748
[01:32:12]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[01:32:12]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[01:32:12]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[01:32:12]  Platform: Linux 2.4.27-3-386
[01:32:12]      Bits: 32
[01:32:12] ************************************ System ************************************
[01:32:12]        OS: Linux 2.6.31-16-generic i686
[01:32:12]       CPU: AMD Athlon(tm) 64 Processor 3400+
[01:32:12]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[01:32:12]      CPUs: 1 Logical, 1 Physical
[01:32:12]    Memory: 1.97 GB
[01:32:12] ********************************************************************************
[01:32:12] Project: 10001 (Run 533, Clone 1, Gen 8)
[01:32:12] Reading tar file par_all27_prot_lipid.inp
[01:32:12] Reading tar file scpismQuartic.inp
[01:32:12] Reading tar file ww_exteq_nowater1.pdb
[01:32:12] Reading tar file ww_exteq_nowater1.psf
[01:32:12] Reading tar file checkpt
[01:32:12] Reading tar file ww_exteq_nowater1.189.pos
[01:32:12] Reading tar file ww_exteq_nowater1.189.vel
[01:32:12] Reading tar file protomol.conf
[01:32:12] Reading tar file core.xml
[01:32:12] Digital signatures verified
[01:32:12] Completed 0 out of 200000 steps (0%)
[01:36:11] Completed 2000 out of 200000 steps (1%)
[01:40:16] Completed 4000 out of 200000 steps (2%)
[01:44:22] Completed 6000 out of 200000 steps (3%)
[01:48:14] Completed 8000 out of 200000 steps (4%)
[01:52:33] Completed 10000 out of 200000 steps (5%)
[01:56:37] Completed 12000 out of 200000 steps (6%)
[02:00:33] Completed 14000 out of 200000 steps (7%)
[02:04:29] Completed 16000 out of 200000 steps (8%)
[02:08:36] Completed 18000 out of 200000 steps (9%)
[02:12:34] Completed 20000 out of 200000 steps (10%)
[02:16:33] Completed 22000 out of 200000 steps (11%)
[02:20:29] Completed 24000 out of 200000 steps (12%)
[02:24:24] Completed 26000 out of 200000 steps (13%)
[02:28:32] Completed 28000 out of 200000 steps (14%)
[02:32:59] Completed 30000 out of 200000 steps (15%)
[02:37:21] Completed 32000 out of 200000 steps (16%)
[02:41:32] Completed 34000 out of 200000 steps (17%)
[02:45:59] Completed 36000 out of 200000 steps (18%)
[02:50:36] Completed 38000 out of 200000 steps (19%)
[02:54:48] Completed 40000 out of 200000 steps (20%)
[02:58:50] Completed 42000 out of 200000 steps (21%)
[03:03:05] Completed 44000 out of 200000 steps (22%)
[03:07:20] Completed 46000 out of 200000 steps (23%)
[03:09:22] CoreStatus = 0 (0)
[03:09:22] Client-core communications error: ERROR 0x0
[03:09:22] Deleting current work unit & continuing...
[03:09:23] - Preparing to get new work unit...
[03:09:23] + Attempting to get work packet
[03:09:23] - Connecting to assignment server
[03:09:24] - Successful: assigned to (129.74.85.48).
[03:09:24] + News From Folding@Home: Welcome to Folding@Home
[03:09:24] Loaded queue successfully.
[03:09:25] + Closed connections
[03:09:30] 
[03:09:30] + Processing work unit
[03:09:30] Core required: FahCore_b4.exe
[03:09:30] Core found.
[03:09:30] Working on Unit 00 [December 26 03:09:30]
[03:09:30] + Working ...
[03:09:30] *********************** Log Started 26/Dec/2009 03:09:30 ***********************
[03:09:30] ************************** ProtoMol Folding@Home Core **************************
[03:09:30]   Version: 21
[03:09:30]      Type: 180
[03:09:30]      Core: ProtoMol
[03:09:30]   Website: http://folding.stanford.edu/
[03:09:30] Copyright: (c) 2009 Stanford University
[03:09:30]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[03:09:30]      Args: -dir work/ -suffix 00 -checkpoint 15 -lifeline 2168 -version 602
[03:09:30] ************************************ Build *************************************
[03:09:30]      Date: Dec 24 2009
[03:09:30]      Time: 06:37:42
[03:09:30]  Revision: 1748
[03:09:30]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[03:09:30]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[03:09:30]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[03:09:30]  Platform: Linux 2.4.27-3-386
[03:09:30]      Bits: 32
[03:09:30] ************************************ System ************************************
[03:09:30]        OS: Linux 2.6.31-16-generic i686
[03:09:30]       CPU: AMD Athlon(tm) 64 Processor 3400+
[03:09:30]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[03:09:30]      CPUs: 1 Logical, 1 Physical
[03:09:30]    Memory: 1.97 GB
[03:09:30] ********************************************************************************
[03:09:30] Project: 10001 (Run 533, Clone 1, Gen 8)
[03:09:30] Reading tar file par_all27_prot_lipid.inp
[03:09:30] Reading tar file scpismQuartic.inp
[03:09:30] Reading tar file ww_exteq_nowater1.pdb
[03:09:30] Reading tar file ww_exteq_nowater1.psf
[03:09:30] Reading tar file checkpt
[03:09:30] Reading tar file ww_exteq_nowater1.189.pos
[03:09:30] Reading tar file ww_exteq_nowater1.189.vel
[03:09:30] Reading tar file protomol.conf
[03:09:30] Reading tar file core.xml
[03:09:30] Digital signatures verified
[03:09:30] Completed 0 out of 200000 steps (0%)
[03:13:31] Completed 2000 out of 200000 steps (1%)
[03:17:38] Completed 4000 out of 200000 steps (2%)
[03:21:44] Completed 6000 out of 200000 steps (3%)
[03:25:38] Completed 8000 out of 200000 steps (4%)
[03:29:58] Completed 10000 out of 200000 steps (5%)
[03:34:04] Completed 12000 out of 200000 steps (6%)
[03:38:02] Completed 14000 out of 200000 steps (7%)
[03:41:59] Completed 16000 out of 200000 steps (8%)
[03:46:07] Completed 18000 out of 200000 steps (9%)
[03:50:07] Completed 20000 out of 200000 steps (10%)
[03:54:07] Completed 22000 out of 200000 steps (11%)
[03:58:05] Completed 24000 out of 200000 steps (12%)
[04:02:00] Completed 26000 out of 200000 steps (13%)
[04:06:10] Completed 28000 out of 200000 steps (14%)
[04:10:30] Completed 30000 out of 200000 steps (15%)
[04:14:45] Completed 32000 out of 200000 steps (16%)
[04:18:49] Completed 34000 out of 200000 steps (17%)
[04:23:09] Completed 36000 out of 200000 steps (18%)
[04:27:40] Completed 38000 out of 200000 steps (19%)
[04:31:44] Completed 40000 out of 200000 steps (20%)
[04:35:39] Completed 42000 out of 200000 steps (21%)
[04:39:53] Completed 44000 out of 200000 steps (22%)
[04:44:09] Completed 46000 out of 200000 steps (23%)
[04:46:14] CoreStatus = 0 (0)
[04:46:14] Client-core communications error: ERROR 0x0
[04:46:14] - Attempting to download new core...
[04:46:14] + Downloading new core: FahCore_b4.exe
[04:46:15] + 10240 bytes downloaded
[04:46:15] + 20480 bytes downloaded
[04:46:15] + 30720 bytes downloaded
[04:46:15] + 40960 bytes downloaded
[04:46:15] + 51200 bytes downloaded
[04:46:15] + 61440 bytes downloaded
[04:46:15] + 71680 bytes downloaded
[04:46:15] + 81920 bytes downloaded
[04:46:15] + 92160 bytes downloaded
[04:46:15] + 102400 bytes downloaded
[04:46:15] + 112640 bytes downloaded
[04:46:15] + 122880 bytes downloaded
[04:46:15] + 133120 bytes downloaded
[04:46:15] + 143360 bytes downloaded
[04:46:15] + 153600 bytes downloaded
[04:46:15] + 163840 bytes downloaded
[04:46:15] + 174080 bytes downloaded
[04:46:15] + 184320 bytes downloaded
[04:46:16] + 194560 bytes downloaded
[04:46:16] + 204800 bytes downloaded
[04:46:16] + 215040 bytes downloaded
[04:46:16] + 225280 bytes downloaded
[04:46:16] + 235520 bytes downloaded
[04:46:16] + 245760 bytes downloaded
[04:46:16] + 256000 bytes downloaded
[04:46:16] + 266240 bytes downloaded
[04:46:16] + 276480 bytes downloaded
[04:46:16] + 286720 bytes downloaded
[04:46:16] + 296960 bytes downloaded
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[04:46:23] Verifying core Core_b4.fah...
[04:46:23] Signature is VALID
[04:46:23] 
[04:46:23] Trying to unzip core FahCore_b4.exe
[04:46:25] Decompressed FahCore_b4.exe (21549840 bytes) successfully
[04:46:25] + Core successfully engaged
[04:46:26] Deleting current work unit & continuing...
[04:46:26] - Preparing to get new work unit...
[04:46:26] + Attempting to get work packet
[04:46:26] - Connecting to assignment server
[04:46:26] - Successful: assigned to (129.74.85.48).
[04:46:26] + News From Folding@Home: Welcome to Folding@Home
[04:46:26] Loaded queue successfully.
[04:46:27] + Closed connections
[04:46:32] 
[04:46:32] + Processing work unit
[04:46:32] Core required: FahCore_b4.exe
[04:46:32] Core found.
[04:46:32] Working on Unit 01 [December 26 04:46:32]
[04:46:32] + Working ...
[04:46:32] *********************** Log Started 26/Dec/2009 04:46:32 ***********************
[04:46:32] ************************** ProtoMol Folding@Home Core **************************
[04:46:32]   Version: 21
[04:46:32]      Type: 180
[04:46:32]      Core: ProtoMol
[04:46:32]   Website: http://folding.stanford.edu/
[04:46:32] Copyright: (c) 2009 Stanford University
[04:46:32]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[04:46:32]      Args: -dir work/ -suffix 01 -checkpoint 15 -lifeline 2168 -version 602
[04:46:32] ************************************ Build *************************************
[04:46:32]      Date: Dec 24 2009
[04:46:32]      Time: 06:37:42
[04:46:32]  Revision: 1748
[04:46:32]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[04:46:32]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[04:46:32]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[04:46:32]  Platform: Linux 2.4.27-3-386
[04:46:32]      Bits: 32
[04:46:32] ************************************ System ************************************
[04:46:32]        OS: Linux 2.6.31-16-generic i686
[04:46:32]       CPU: AMD Athlon(tm) 64 Processor 3400+
[04:46:32]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[04:46:32]      CPUs: 1 Logical, 1 Physical
[04:46:32]    Memory: 1.97 GB
[04:46:32] ********************************************************************************
[04:46:32] Project: 10001 (Run 533, Clone 1, Gen 8)
[04:46:32] Reading tar file par_all27_prot_lipid.inp
[04:46:32] Reading tar file scpismQuartic.inp
[04:46:32] Reading tar file ww_exteq_nowater1.pdb
[04:46:32] Reading tar file ww_exteq_nowater1.psf
[04:46:32] Reading tar file checkpt
[04:46:32] Reading tar file ww_exteq_nowater1.189.pos
[04:46:32] Reading tar file ww_exteq_nowater1.189.vel
[04:46:32] Reading tar file protomol.conf
[04:46:32] Reading tar file core.xml
[04:46:32] Digital signatures verified
[04:46:33] Completed 0 out of 200000 steps (0%)
[04:50:35] Completed 2000 out of 200000 steps (1%)
[04:54:45] Completed 4000 out of 200000 steps (2%)
[04:58:54] Completed 6000 out of 200000 steps (3%)
[05:02:57] Completed 8000 out of 200000 steps (4%)
[05:07:29] Completed 10000 out of 200000 steps (5%)
[05:11:46] Completed 12000 out of 200000 steps (6%)
[05:15:53] Completed 14000 out of 200000 steps (7%)
[05:20:00] Completed 16000 out of 200000 steps (8%)
[05:24:19] Completed 18000 out of 200000 steps (9%)
[05:28:29] Completed 20000 out of 200000 steps (10%)
[05:42:54] Completed 22000 out of 200000 steps (11%)
[05:46:55] Completed 24000 out of 200000 steps (12%)
[05:50:53] Completed 26000 out of 200000 steps (13%)
[05:55:05] Completed 28000 out of 200000 steps (14%)
[05:59:29] Completed 30000 out of 200000 steps (15%)
[06:03:46] Completed 32000 out of 200000 steps (16%)
[06:07:53] Completed 34000 out of 200000 steps (17%)
[06:12:15] Completed 36000 out of 200000 steps (18%)
[06:16:48] Completed 38000 out of 200000 steps (19%)
[06:20:55] Completed 40000 out of 200000 steps (20%)
[06:24:53] Completed 42000 out of 200000 steps (21%)
[06:29:10] Completed 44000 out of 200000 steps (22%)
[06:33:37] Completed 46000 out of 200000 steps (23%)
[06:35:45] CoreStatus = 0 (0)
[06:35:45] Client-core communications error: ERROR 0x0
[06:35:45] Deleting current work unit & continuing...
[06:35:47] - Preparing to get new work unit...
[06:35:47] + Attempting to get work packet
[06:35:47] - Connecting to assignment server
[06:35:47] - Successful: assigned to (129.74.85.48).
[06:35:47] + News From Folding@Home: Welcome to Folding@Home
[06:35:48] Loaded queue successfully.
[06:35:48] + Closed connections
[06:35:53] 
[06:35:53] + Processing work unit
[06:35:53] Core required: FahCore_b4.exe
[06:35:53] Core found.
[06:35:53] Working on Unit 02 [December 26 06:35:53]
[06:35:53] + Working ...

[djchandler]

FAHlog part two covering 10 consecutive assignment period.

Code: Select all

[06:35:54] *********************** Log Started 26/Dec/2009 06:35:54 ***********************
[06:35:54] ************************** ProtoMol Folding@Home Core **************************
[06:35:54]   Version: 21
[06:35:54]      Type: 180
[06:35:54]      Core: ProtoMol
[06:35:54]   Website: http://folding.stanford.edu/
[06:35:54] Copyright: (c) 2009 Stanford University
[06:35:54]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[06:35:54]      Args: -dir work/ -suffix 02 -checkpoint 15 -lifeline 2168 -version 602
[06:35:54] ************************************ Build *************************************
[06:35:54]      Date: Dec 24 2009
[06:35:54]      Time: 06:37:42
[06:35:54]  Revision: 1748
[06:35:54]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[06:35:54]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[06:35:54]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[06:35:54]  Platform: Linux 2.4.27-3-386
[06:35:54]      Bits: 32
[06:35:54] ************************************ System ************************************
[06:35:54]        OS: Linux 2.6.31-16-generic i686
[06:35:54]       CPU: AMD Athlon(tm) 64 Processor 3400+
[06:35:54]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[06:35:54]      CPUs: 1 Logical, 1 Physical
[06:35:54]    Memory: 1.97 GB
[06:35:54] ********************************************************************************
[06:35:54] Project: 10001 (Run 533, Clone 1, Gen 8)
[06:35:54] Reading tar file par_all27_prot_lipid.inp
[06:35:54] Reading tar file scpismQuartic.inp
[06:35:54] Reading tar file ww_exteq_nowater1.pdb
[06:35:54] Reading tar file ww_exteq_nowater1.psf
[06:35:54] Reading tar file checkpt
[06:35:54] Reading tar file ww_exteq_nowater1.189.pos
[06:35:54] Reading tar file ww_exteq_nowater1.189.vel
[06:35:54] Reading tar file protomol.conf
[06:35:54] Reading tar file core.xml
[06:35:54] Digital signatures verified
[06:35:54] Completed 0 out of 200000 steps (0%)
[06:40:00] Completed 2000 out of 200000 steps (1%)
[06:44:13] Completed 4000 out of 200000 steps (2%)
[06:48:26] Completed 6000 out of 200000 steps (3%)
[06:52:25] Completed 8000 out of 200000 steps (4%)
[06:56:53] Completed 10000 out of 200000 steps (5%)
[07:01:05] Completed 12000 out of 200000 steps (6%)
[07:16:05] Completed 14000 out of 200000 steps (7%)
[07:20:02] Completed 16000 out of 200000 steps (8%)
[07:24:09] Completed 18000 out of 200000 steps (9%)
[07:28:07] Completed 20000 out of 200000 steps (10%)
[07:32:05] Completed 22000 out of 200000 steps (11%)
[07:36:02] Completed 24000 out of 200000 steps (12%)
[07:39:56] Completed 26000 out of 200000 steps (13%)
[07:44:04] Completed 28000 out of 200000 steps (14%)
[07:48:23] Completed 30000 out of 200000 steps (15%)
[07:52:36] Completed 32000 out of 200000 steps (16%)
[07:56:39] Completed 34000 out of 200000 steps (17%)
[08:00:57] Completed 36000 out of 200000 steps (18%)
[08:05:25] Completed 38000 out of 200000 steps (19%)
[08:09:28] Completed 40000 out of 200000 steps (20%)
[08:13:22] Completed 42000 out of 200000 steps (21%)
[08:17:34] Completed 44000 out of 200000 steps (22%)
[08:21:49] Completed 46000 out of 200000 steps (23%)
[08:23:51] CoreStatus = 0 (0)
[08:23:51] Client-core communications error: ERROR 0x0
[08:23:51] Deleting current work unit & continuing...
[08:23:53] - Preparing to get new work unit...
[08:23:53] + Attempting to get work packet
[08:23:53] - Connecting to assignment server
[08:23:53] - Successful: assigned to (129.74.85.48).
[08:23:53] + News From Folding@Home: Welcome to Folding@Home
[08:23:53] Loaded queue successfully.
[08:23:55] + Closed connections
[08:24:00] 
[08:24:00] + Processing work unit
[08:24:00] Core required: FahCore_b4.exe
[08:24:00] Core found.
[08:24:00] Working on Unit 03 [December 26 08:24:00]
[08:24:00] + Working ...
[08:24:00] *********************** Log Started 26/Dec/2009 08:24:00 ***********************
[08:24:00] ************************** ProtoMol Folding@Home Core **************************
[08:24:00]   Version: 21
[08:24:00]      Type: 180
[08:24:00]      Core: ProtoMol
[08:24:00]   Website: http://folding.stanford.edu/
[08:24:00] Copyright: (c) 2009 Stanford University
[08:24:00]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[08:24:00]      Args: -dir work/ -suffix 03 -checkpoint 15 -lifeline 2168 -version 602
[08:24:00] ************************************ Build *************************************
[08:24:00]      Date: Dec 24 2009
[08:24:00]      Time: 06:37:42
[08:24:00]  Revision: 1748
[08:24:00]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[08:24:00]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[08:24:00]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[08:24:00]  Platform: Linux 2.4.27-3-386
[08:24:00]      Bits: 32
[08:24:00] ************************************ System ************************************
[08:24:00]        OS: Linux 2.6.31-16-generic i686
[08:24:00]       CPU: AMD Athlon(tm) 64 Processor 3400+
[08:24:00]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[08:24:00]      CPUs: 1 Logical, 1 Physical
[08:24:00]    Memory: 1.97 GB
[08:24:00] ********************************************************************************
[08:24:00] Project: 10001 (Run 533, Clone 1, Gen 8)
[08:24:00] Reading tar file par_all27_prot_lipid.inp
[08:24:00] Reading tar file scpismQuartic.inp
[08:24:00] Reading tar file ww_exteq_nowater1.pdb
[08:24:00] Reading tar file ww_exteq_nowater1.psf
[08:24:00] Reading tar file checkpt
[08:24:00] Reading tar file ww_exteq_nowater1.189.pos
[08:24:00] Reading tar file ww_exteq_nowater1.189.vel
[08:24:00] Reading tar file protomol.conf
[08:24:00] Reading tar file core.xml
[08:24:00] Digital signatures verified
[08:24:01] Completed 0 out of 200000 steps (0%)
[08:27:59] Completed 2000 out of 200000 steps (1%)
[08:32:04] Completed 4000 out of 200000 steps (2%)
[08:36:09] Completed 6000 out of 200000 steps (3%)
[08:40:01] Completed 8000 out of 200000 steps (4%)
[08:44:20] Completed 10000 out of 200000 steps (5%)
[08:48:25] Completed 12000 out of 200000 steps (6%)
[08:52:20] Completed 14000 out of 200000 steps (7%)
[08:56:15] Completed 16000 out of 200000 steps (8%)
[09:00:22] Completed 18000 out of 200000 steps (9%)
[09:04:20] Completed 20000 out of 200000 steps (10%)
[09:08:19] Completed 22000 out of 200000 steps (11%)
[09:12:15] Completed 24000 out of 200000 steps (12%)
[09:16:09] Completed 26000 out of 200000 steps (13%)
[09:20:17] Completed 28000 out of 200000 steps (14%)
[09:24:36] Completed 30000 out of 200000 steps (15%)
[09:28:48] Completed 32000 out of 200000 steps (16%)
[09:32:51] Completed 34000 out of 200000 steps (17%)
[09:37:09] Completed 36000 out of 200000 steps (18%)
[09:41:37] Completed 38000 out of 200000 steps (19%)
[09:45:39] Completed 40000 out of 200000 steps (20%)
[09:49:33] Completed 42000 out of 200000 steps (21%)
[09:53:45] Completed 44000 out of 200000 steps (22%)
[09:58:00] Completed 46000 out of 200000 steps (23%)
[10:00:01] CoreStatus = 8B (139)
[10:00:01] Client-core communications error: ERROR 0x8b
[10:00:01] - Attempting to download new core...
[10:00:01] + Downloading new core: FahCore_b4.exe
[10:00:02] + 10240 bytes downloaded
[10:00:02] ...
[10:00:10] + 5609500 bytes downloaded
[10:00:10] Verifying core Core_b4.fah...
[10:00:10] Signature is VALID
[10:00:10] 
[10:00:10] Trying to unzip core FahCore_b4.exe
[10:00:11] Decompressed FahCore_b4.exe (21549840 bytes) successfully
[10:00:11] + Core successfully engaged
[10:00:12] Deleting current work unit & continuing...
[10:00:12] - Preparing to get new work unit...
[10:00:12] + Attempting to get work packet
[10:00:12] - Connecting to assignment server
[10:00:13] - Successful: assigned to (129.74.85.48).
[10:00:13] + News From Folding@Home: Welcome to Folding@Home
[10:00:13] Loaded queue successfully.
[10:00:14] + Closed connections
[10:00:19] 
[10:00:19] + Processing work unit
[10:00:19] Core required: FahCore_b4.exe
[10:00:19] Core found.
[10:00:19] Working on Unit 04 [December 26 10:00:19]
[10:00:19] + Working ...
[10:00:19] *********************** Log Started 26/Dec/2009 10:00:19 ***********************
[10:00:19] ************************** ProtoMol Folding@Home Core **************************
[10:00:19]   Version: 21
[10:00:19]      Type: 180
[10:00:19]      Core: ProtoMol
[10:00:19]   Website: http://folding.stanford.edu/
[10:00:19] Copyright: (c) 2009 Stanford University
[10:00:19]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[10:00:19]      Args: -dir work/ -suffix 04 -checkpoint 15 -lifeline 2168 -version 602
[10:00:19] ************************************ Build *************************************
[10:00:19]      Date: Dec 24 2009
[10:00:19]      Time: 06:37:42
[10:00:19]  Revision: 1748
[10:00:19]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[10:00:19]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[10:00:19]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[10:00:19]  Platform: Linux 2.4.27-3-386
[10:00:19]      Bits: 32
[10:00:19] ************************************ System ************************************
[10:00:19]        OS: Linux 2.6.31-16-generic i686
[10:00:19]       CPU: AMD Athlon(tm) 64 Processor 3400+
[10:00:19]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[10:00:19]      CPUs: 1 Logical, 1 Physical
[10:00:19]    Memory: 1.97 GB
[10:00:19] ********************************************************************************
[10:00:19] Project: 10001 (Run 533, Clone 1, Gen 8)
[10:00:19] Reading tar file par_all27_prot_lipid.inp
[10:00:19] Reading tar file scpismQuartic.inp
[10:00:19] Reading tar file ww_exteq_nowater1.pdb
[10:00:19] Reading tar file ww_exteq_nowater1.psf
[10:00:19] Reading tar file checkpt
[10:00:19] Reading tar file ww_exteq_nowater1.189.pos
[10:00:19] Reading tar file ww_exteq_nowater1.189.vel
[10:00:19] Reading tar file protomol.conf
[10:00:19] Reading tar file core.xml
[10:00:19] Digital signatures verified
[10:00:20] Completed 0 out of 200000 steps (0%)
[10:04:18] Completed 2000 out of 200000 steps (1%)
[10:08:24] Completed 4000 out of 200000 steps (2%)
[10:12:29] Completed 6000 out of 200000 steps (3%)
[10:16:20] Completed 8000 out of 200000 steps (4%)
[10:20:40] Completed 10000 out of 200000 steps (5%)
[10:24:45] Completed 12000 out of 200000 steps (6%)
[10:28:40] Completed 14000 out of 200000 steps (7%)
[10:32:36] Completed 16000 out of 200000 steps (8%)
[10:36:43] Completed 18000 out of 200000 steps (9%)
[10:40:41] Completed 20000 out of 200000 steps (10%)
[10:44:39] Completed 22000 out of 200000 steps (11%)
[10:48:36] Completed 24000 out of 200000 steps (12%)
[10:52:30] Completed 26000 out of 200000 steps (13%)
[10:56:38] Completed 28000 out of 200000 steps (14%)
[11:00:56] Completed 30000 out of 200000 steps (15%)
[11:05:09] Completed 32000 out of 200000 steps (16%)
[11:09:12] Completed 34000 out of 200000 steps (17%)
[11:13:30] Completed 36000 out of 200000 steps (18%)
[11:18:01] Completed 38000 out of 200000 steps (19%)
[11:22:04] Completed 40000 out of 200000 steps (20%)
[11:25:58] Completed 42000 out of 200000 steps (21%)
[11:30:10] Completed 44000 out of 200000 steps (22%)
[11:34:25] Completed 46000 out of 200000 steps (23%)
[11:36:28] CoreStatus = 0 (0)
[11:36:28] Client-core communications error: ERROR 0x0
[11:36:28] Deleting current work unit & continuing...
[11:36:30] - Preparing to get new work unit...
[11:36:30] + Attempting to get work packet
[11:36:30] - Connecting to assignment server
[11:36:30] - Successful: assigned to (129.74.85.48).
[11:36:30] + News From Folding@Home: Welcome to Folding@Home
[11:36:30] Loaded queue successfully.
[11:36:31] + Closed connections
[11:36:36] 
[11:36:36] + Processing work unit
[11:36:36] Core required: FahCore_b4.exe
[11:36:36] Core found.
[11:36:36] Working on Unit 05 [December 26 11:36:36]
[11:36:36] + Working ...
[11:36:36] *********************** Log Started 26/Dec/2009 11:36:36 ***********************
[11:36:36] ************************** ProtoMol Folding@Home Core **************************
[11:36:36]   Version: 21
[11:36:36]      Type: 180
[11:36:36]      Core: ProtoMol
[11:36:36]   Website: http://folding.stanford.edu/
[11:36:36] Copyright: (c) 2009 Stanford University
[11:36:36]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[11:36:36]      Args: -dir work/ -suffix 05 -checkpoint 15 -lifeline 2168 -version 602
[11:36:36] ************************************ Build *************************************
[11:36:36]      Date: Dec 24 2009
[11:36:36]      Time: 06:37:42
[11:36:36]  Revision: 1748
[11:36:36]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[11:36:36]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[11:36:36]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[11:36:36]  Platform: Linux 2.4.27-3-386
[11:36:36]      Bits: 32
[11:36:36] ************************************ System ************************************
[11:36:36]        OS: Linux 2.6.31-16-generic i686
[11:36:36]       CPU: AMD Athlon(tm) 64 Processor 3400+
[11:36:36]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[11:36:36]      CPUs: 1 Logical, 1 Physical
[11:36:36]    Memory: 1.97 GB
[11:36:36] ********************************************************************************
[11:36:36] Project: 10001 (Run 533, Clone 1, Gen 8)
[11:36:36] Reading tar file par_all27_prot_lipid.inp
[11:36:36] Reading tar file scpismQuartic.inp
[11:36:36] Reading tar file ww_exteq_nowater1.pdb
[11:36:36] Reading tar file ww_exteq_nowater1.psf
[11:36:36] Reading tar file checkpt
[11:36:36] Reading tar file ww_exteq_nowater1.189.pos
[11:36:36] Reading tar file ww_exteq_nowater1.189.vel
[11:36:36] Reading tar file protomol.conf
[11:36:36] Reading tar file core.xml
[11:36:36] Digital signatures verified
[11:36:37] Completed 0 out of 200000 steps (0%)
[11:40:35] Completed 2000 out of 200000 steps (1%)
[11:44:40] Completed 4000 out of 200000 steps (2%)
[11:48:46] Completed 6000 out of 200000 steps (3%)
[11:52:37] Completed 8000 out of 200000 steps (4%)
[11:56:56] Completed 10000 out of 200000 steps (5%)
[12:01:01] Completed 12000 out of 200000 steps (6%)
[12:04:56] Completed 14000 out of 200000 steps (7%)
[12:08:52] Completed 16000 out of 200000 steps (8%)
[12:12:58] Completed 18000 out of 200000 steps (9%)
[12:16:56] Completed 20000 out of 200000 steps (10%)
[12:20:55] Completed 22000 out of 200000 steps (11%)
[12:24:51] Completed 24000 out of 200000 steps (12%)
[12:28:46] Completed 26000 out of 200000 steps (13%)
[12:32:55] Completed 28000 out of 200000 steps (14%)
[12:37:38] Completed 30000 out of 200000 steps (15%)
[12:41:55] Completed 32000 out of 200000 steps (16%)
[12:45:58] Completed 34000 out of 200000 steps (17%)
[12:50:15] Completed 36000 out of 200000 steps (18%)
[12:54:43] Completed 38000 out of 200000 steps (19%)
[12:58:46] Completed 40000 out of 200000 steps (20%)
[13:02:39] Completed 42000 out of 200000 steps (21%)
[13:06:51] Completed 44000 out of 200000 steps (22%)
[13:11:06] Completed 46000 out of 200000 steps (23%)
[13:13:08] CoreStatus = 0 (0)
[13:13:08] Client-core communications error: ERROR 0x0
[13:13:08] Deleting current work unit & continuing...
[13:13:10] - Preparing to get new work unit...
[13:13:10] + Attempting to get work packet
[13:13:10] - Connecting to assignment server
[13:13:10] - Successful: assigned to (129.74.85.48).
[13:13:10] + News From Folding@Home: Welcome to Folding@Home
[13:13:10] Loaded queue successfully.
[13:13:11] + Closed connections
[13:13:16] 
[13:13:16] + Processing work unit
[13:13:16] Core required: FahCore_b4.exe
[13:13:16] Core found.
[13:13:16] Working on Unit 06 [December 26 13:13:16]
[13:13:16] + Working ...
[13:13:16] *********************** Log Started 26/Dec/2009 13:13:16 ***********************
[13:13:16] ************************** ProtoMol Folding@Home Core **************************
[13:13:16]   Version: 21
[13:13:16]      Type: 180
[13:13:16]      Core: ProtoMol
[13:13:16]   Website: http://folding.stanford.edu/
[13:13:16] Copyright: (c) 2009 Stanford University
[13:13:16]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[13:13:16]      Args: -dir work/ -suffix 06 -checkpoint 15 -lifeline 2168 -version 602
[13:13:16] ************************************ Build *************************************
[13:13:16]      Date: Dec 24 2009
[13:13:16]      Time: 06:37:42
[13:13:16]  Revision: 1748
[13:13:16]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[13:13:16]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[13:13:16]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[13:13:16]  Platform: Linux 2.4.27-3-386
[13:13:16]      Bits: 32
[13:13:16] ************************************ System ************************************
[13:13:16]        OS: Linux 2.6.31-16-generic i686
[13:13:16]       CPU: AMD Athlon(tm) 64 Processor 3400+
[13:13:16]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[13:13:16]      CPUs: 1 Logical, 1 Physical
[13:13:16]    Memory: 1.97 GB
[13:13:16] ********************************************************************************
[13:13:16] Project: 10001 (Run 533, Clone 1, Gen 8)
[13:13:16] Reading tar file par_all27_prot_lipid.inp
[13:13:16] Reading tar file scpismQuartic.inp
[13:13:16] Reading tar file ww_exteq_nowater1.pdb
[13:13:16] Reading tar file ww_exteq_nowater1.psf
[13:13:16] Reading tar file checkpt
[13:13:16] Reading tar file ww_exteq_nowater1.189.pos
[13:13:16] Reading tar file ww_exteq_nowater1.189.vel
[13:13:16] Reading tar file protomol.conf
[13:13:16] Reading tar file core.xml
[13:13:16] Digital signatures verified
[13:13:16] Completed 0 out of 200000 steps (0%)
[13:17:16] Completed 2000 out of 200000 steps (1%)
[13:21:22] Completed 4000 out of 200000 steps (2%)
[13:25:28] Completed 6000 out of 200000 steps (3%)
[13:29:20] Completed 8000 out of 200000 steps (4%)
[13:33:40] Completed 10000 out of 200000 steps (5%)
[13:37:46] Completed 12000 out of 200000 steps (6%)
[13:41:43] Completed 14000 out of 200000 steps (7%)
[13:45:39] Completed 16000 out of 200000 steps (8%)
[13:49:46] Completed 18000 out of 200000 steps (9%)
[13:53:46] Completed 20000 out of 200000 steps (10%)
[13:57:45] Completed 22000 out of 200000 steps (11%)
[14:01:42] Completed 24000 out of 200000 steps (12%)
[14:05:36] Completed 26000 out of 200000 steps (13%)
[14:09:45] Completed 28000 out of 200000 steps (14%)
[14:14:05] Completed 30000 out of 200000 steps (15%)
[14:18:19] Completed 32000 out of 200000 steps (16%)
[14:22:23] Completed 34000 out of 200000 steps (17%)
[14:26:41] Completed 36000 out of 200000 steps (18%)
[14:31:10] Completed 38000 out of 200000 steps (19%)
[14:35:14] Completed 40000 out of 200000 steps (20%)
[14:39:09] Completed 42000 out of 200000 steps (21%)
[14:43:21] Completed 44000 out of 200000 steps (22%)
[14:47:37] Completed 46000 out of 200000 steps (23%)
[14:49:39] CoreStatus = 0 (0)
[14:49:39] Client-core communications error: ERROR 0x0
[14:49:39] - Attempting to download new core...
[14:49:39] + Downloading new core: FahCore_b4.exe
[14:49:39] + 10240 bytes downloaded
[14:49:39]...
[14:49:47] + 5609500 bytes downloaded
[14:49:47] Verifying core Core_b4.fah...
[14:49:48] Signature is VALID
[14:49:48] 
[14:49:48] Trying to unzip core FahCore_b4.exe
[14:49:49] Decompressed FahCore_b4.exe (21549840 bytes) successfully
[14:49:49] + Core successfully engaged
[14:49:50] Deleting current work unit & continuing...
[14:49:50] - Preparing to get new work unit...
[14:49:50] + Attempting to get work packet
[14:49:50] - Connecting to assignment server
[14:49:51] - Successful: assigned to (129.74.85.48).
[14:49:51] + News From Folding@Home: Welcome to Folding@Home
[14:49:51] Loaded queue successfully.
[14:49:51] + Closed connections
[14:49:56] 
[14:49:56] + Processing work unit
[14:49:56] Core required: FahCore_b4.exe
[14:49:56] Core found.
[14:49:56] Working on Unit 07 [December 26 14:49:56]
[14:49:56] + Working ...
[14:49:56] *********************** Log Started 26/Dec/2009 14:49:56 ***********************
[14:49:56] ************************** ProtoMol Folding@Home Core **************************
[14:49:56]   Version: 21
[14:49:56]      Type: 180
[14:49:56]      Core: ProtoMol
[14:49:56]   Website: http://folding.stanford.edu/
[14:49:56] Copyright: (c) 2009 Stanford University
[14:49:56]    Author: Joseph Coffland <joseph@cauldrondevelopment.com>
[14:49:56]      Args: -dir work/ -suffix 07 -checkpoint 15 -lifeline 2168 -version 602
[14:49:56] ************************************ Build *************************************
[14:49:56]      Date: Dec 24 2009
[14:49:56]      Time: 06:37:42
[14:49:56]  Revision: 1748
[14:49:56]  Compiler: Intel(R) C++ g++ 4.1 mode 1110
[14:49:56]   Options: -std=gnu++98 -mia32 -O3 -funroll-loops
[14:49:56]            -axSSE2,SSE3,SSSE3,SSE4.1,SSE4.2 -restrict
[14:49:56]  Platform: Linux 2.4.27-3-386
[14:49:56]      Bits: 32
[14:49:56] ************************************ System ************************************
[14:49:56]        OS: Linux 2.6.31-16-generic i686
[14:49:56]       CPU: AMD Athlon(tm) 64 Processor 3400+
[14:49:56]    CPU ID: AuthenticAMD Family 15 Model 44 Stepping 0
[14:49:56]      CPUs: 1 Logical, 1 Physical
[14:49:56]    Memory: 1.97 GB
[14:49:56] ********************************************************************************
[14:49:56] Project: 10001 (Run 533, Clone 1, Gen 8)
[14:49:56] Reading tar file par_all27_prot_lipid.inp
[14:49:56] Reading tar file scpismQuartic.inp
[14:49:56] Reading tar file ww_exteq_nowater1.pdb
[14:49:56] Reading tar file ww_exteq_nowater1.psf
[14:49:56] Reading tar file checkpt
[14:49:56] Reading tar file ww_exteq_nowater1.189.pos
[14:49:56] Reading tar file ww_exteq_nowater1.189.vel
[14:49:56] Reading tar file protomol.conf
[14:49:56] Reading tar file core.xml
[14:49:56] Digital signatures verified
[14:49:57] Completed 0 out of 200000 steps (0%)
[14:53:56] Completed 2000 out of 200000 steps (1%)
[14:58:01] Completed 4000 out of 200000 steps (2%)
[15:02:06] Completed 6000 out of 200000 steps (3%)
[15:05:59] Completed 8000 out of 200000 steps (4%)
[15:10:18] Completed 10000 out of 200000 steps (5%)
[15:14:23] Completed 12000 out of 200000 steps (6%)
[15:18:19] Completed 14000 out of 200000 steps (7%)
[15:22:15] Completed 16000 out of 200000 steps (8%)
[15:26:23] Completed 18000 out of 200000 steps (9%)
[15:30:21] Completed 20000 out of 200000 steps (10%)
[15:34:19] Completed 22000 out of 200000 steps (11%)
[15:38:16] Completed 24000 out of 200000 steps (12%)
[15:42:10] Completed 26000 out of 200000 steps (13%)
[15:46:19] Completed 28000 out of 200000 steps (14%)
[15:50:38] Completed 30000 out of 200000 steps (15%)
[15:54:51] Completed 32000 out of 200000 steps (16%)
[15:58:54] Completed 34000 out of 200000 steps (17%)
[16:03:12] Completed 36000 out of 200000 steps (18%)
[16:07:41] Completed 38000 out of 200000 steps (19%)
[16:11:43] Completed 40000 out of 200000 steps (20%)
[16:15:38] Completed 42000 out of 200000 steps (21%)
[16:19:50] Completed 44000 out of 200000 steps (22%)
[16:24:06] Completed 46000 out of 200000 steps (23%)
[16:26:07] CoreStatus = 0 (0)
[16:26:07] Client-core communications error: ERROR 0x0
[16:26:07] Deleting current work unit & continuing...
[16:26:08] - Preparing to get new work unit...
[16:26:08] + Attempting to get work packet
[16:26:08] - Connecting to assignment server
[16:26:09] - Successful: assigned to (129.74.85.48).
[16:26:09] + News From Folding@Home: Welcome to Folding@Home
[16:26:09] Loaded queue successfully.
[17:26:09] + Could not connect to Work Server
[17:26:09] - Attempt #1  to get work failed, and no other work to do.
             Waiting before retry.

[djchandler]

Went to the post on Dr. Pande's blog about this b4 core. I'm going to install MPIch2 on the box that's getting those WUs and see if that makes a difference. Is there any way for this to be available on your servers and downloaded with the b4 core? Probably not as root access may be necessary.

Anyway, I'm willing to give it a try. Shoot me this WU again if possible when the current one (p6313) finishes. please.

How about an error trapping routine in the b4 core to check if MPIch is installed? I'm reading that only the master node needs it installed, but I'm not sure how this is being implemented. Think this will help?

[7im]

10 WUs in a row is a bug, IIRC. Previous clients/fahcores moved on to a new WU sooner than that. The b4 core doesn't handle some error trapping gracefully yet. It's a whole new fahcore type, so it has a few more kinks to work out yet.

Also, there may be an issue with the v6.02 client vs. the v6.2x client. Upgrade if you can.

[bruce]

If one of the wudata_0*.dat files that caused this problem is still somewhere on your system, send me a PM.

[djchandler]

Also, there may be an issue with the v6.02 client vs. the v6.2x client. Upgrade if you can.

This is a 32-bit OS. Some MythTV components/drivers still too buggy on 64-bit, so that's why I'm running 32-bit even though the hardware (Athlon 64 3400+, Venice core [sse3 implemented] and 2 gigs of RAM) will handle a 64-bit OS easily. So I'm stuck with 6.02 for now.

Maybe I should turn off the -adv flag, but I'm a glutton for punishment. I really don't mind losing a few points if we can get this de-bugged.

Any way to inform the client/core that MPIch is now installed locally?

[djchandler]

If one of the wudata_0*.dat files that caused this problem is still somewhere on your system, send me a PM.

I'll check ASAP; have several projects on my plate at the moment though.

[djchandler]

Also, there may be an issue with the v6.02 client vs. the v6.2x client. Upgrade if you can.

And maybe that it's the ability to run 64-bit that makes a difference. Thanks for giving me the idea to try a 64-bit client instead of the 32 bit. Seems the 64-bit kernel even running the 6.02 client cures some problems too. Running on almost identical hardware (same chipset and virtually identical CPUs), Core_B4 looks like it's doing better on the notfred running native 64-bit. It's ending early, but it's not getting the core-client communication error.

A big thank you to Bruce too for all the support via PM.

Even though this other WU EUE'd, here's what happened on the notfred. I'm betting that 7im is right--the Core_B4 requires 6.2x plus running 64-bit to complete correctly.

Code: Select all

[21:38:22] Completed 116000 out of 200000 steps (58%)
[21:41:14] Saving result file logfile_01.txt
[21:41:14] Saving result file checkpt
[21:41:14] Saving result file checkpt.crc
[21:41:14] Saving result file log.txt
[21:41:14] Saving result file protomol.conf
[21:41:14] Saving result file ww.dcd
[21:41:15] Saving result file ww_exteq_nowater1.239.pos
[21:41:15] Saving result file ww_exteq_nowater1.239.vel
[21:41:15] Folding@home Core Shutdown: FINISHED_UNIT
[21:41:16] CoreStatus = 64 (100)
[21:41:16] Sending work to server
[21:41:16] - Read packet limit of 540015616... Set to 524286976.
[21:41:16] + Attempting to send results
[21:41:32] + Results successfully sent
[21:41:32] Thank you for your contribution to Folding@Home.

[djchandler]

7im is on the money. You need 6.2x client plus I think you need to be running 64-bit for the Core_B4. Notfred was using 6.02 and was spewing all sorts of garbage eventually.

I wiped my USB stick, installed a command line only copy of Debian 64 5.x, installed samba and set up lan access, then manually installed the 6.24 beta client. It certainly is faster too. It's lean and mean for an old CPU (Athlon 64 3200+ Venice core (90nm, SSE3, single core).