Folding Forum

Hi all, A quick note that we're reopening this project for a little while in order to get more sampling on some of our clones to match our other project (p18201) so we have truly equal comparisons between the datasets. You should start to see (if you haven't already) WUs from Clones 0 + 1 of this pr...

<atoms v="302700"/> <timeout v="2"/> <deadline v="5"/> <stats-credit v="70000"/> In other p182XX projects we have simulated ApoE variants to try to understand the conformations that ApoE adopts in solution. We are also working to verify these findings in the ...

Hi all, One more note on this project. We've finished a first pass analysis on the data we collected for p18202 and have written a paper detailing this analysis and findings. While this paper is still in peer review for official publication, we've made the paper available via the biology preprinting...

Excellent!! Glad that you were able to upload these!

Hi KhaleedWalten01, Would you be willing to provide the Project/Run/Clone/Gen codes for a few of the WUs that are stuck? In particular it would be good if there's a WU that is currently stuck. I've been working to with the lead FAH developer to try and track down what exactly is going awry here. Tha...

Thanks- we captured some packet data on WUs from another user which I'm hoping we'll be able to look at once everyone's back from the holiday. As far as I'm aware we haven't changed anything on our end at all either, but I'll ask around tomorrow. Has anyone had this issue on other projects, or has i...

Max-packet used to be a setting that could be used for folks working on dial-up modems but I don't think it is widely used any more (and may not be supported?). No, but good thinking. There are several WUs that have been reported stuck but have not been quick failed. Right? That's the thing I keep s...

Oleg, I did manage to get a TCP capture setup. Would you be willing to post one of the following to help in our TCP analysis? 1) Windows for attempted returns from UTC: 2021-11-19 15:40 to 18:40. (e.g. in your most recent post 11:06:00-11:07:33) 2) Log file from the stuck WU trimmed to the time UTC:...

Ok- one additional suggestion while I hunt down whether we can do a TCP. If you are on a Desktop computer, could you try navigating to "advanced settings" on FAHcontrol (configure-> Advanced) and see if the "Power, pause work while on battery power." box is checked? The one case ...

Oleg- thanks for posting! Are you still having this issue? We have had some rare issues with WUs not being returned to the server for reasons we haven't been able to track down yet. If you're still having this issue, we'd like to try a TCP capture to see if we can get an idea of what's going on. Tha...

As a quick update to this project- we've acquired a huge amount of data (around 3.4ms of aggregate simulation time!) and are in the process of analyzing this data now. We may decide to re-release this project in the future if we need further sampling, but for the time being we've paused further issu...

Very curious and great to hear! We are able to do a TCP, but missed the window for the failed returns this time. If this happens again I think it may be worthwhile to try and push the TCP a bit more to see if we can actually capture what's causing the failed transfer. This will be especially useful ...

Max-packet used to be a setting that could be used for folks working on dial-up modems but I don't think it is widely used any more (and may not be supported?). Technically, it's still supported but it has been adjusted in a recent client update -- perhaps because it was causing too many WUs to be ...

Hi Gary480six and thanks for the followup. Regarding the status of this particular WU- it was assigned once on 8/31 and failed within 20 minutes of assignment (as seen on WU Status). The very next assignment of this WU was on 10/30 (to you). When it got stuck and hit the timeout (2 days) it became e...

Thanks parkut for the followup information. This remains perplexing- the only thing that recently has changed on our end is that I reset the server a couple of days before the stuck WU was assigned (on the 17th) but I wouldn't expect any wrinkles from that several days later. Other WU returns are of...