Search found 59 matches

by jjmiller
Wed Jun 01, 2022 12:48 pm
Forum: Issues with a specific WU
Topic: Project: 18201 (Run 24975, Clone 0, Gen 21)
Replies: 16
Views: 24278

Re: Project: 18201 (Run 24975, Clone 0, Gen 21)

Awesome, glad to hear there aren't any stuck and fingers crossed it stays that way! I did disable the other project housed on that server, so in the event we were seeing some weird intermittent overtaxed server issue (I'm not thinking so), hopefully that also helps.

Thanks,
by jjmiller
Tue May 31, 2022 10:41 pm
Forum: Issues with a specific WU
Topic: uploading problem project 18201
Replies: 2
Views: 330

Re: uploading problem project 18201

Hi Runaway-

Apologies I'd missed this earlier and apologies that 18201 is throwing snags your way. Hopefully you aren't still having troubles with 18201.

Thanks,
by jjmiller
Tue May 31, 2022 10:39 pm
Forum: Issues with a specific WU
Topic: Project: 18201 (Run 24975, Clone 0, Gen 21)
Replies: 16
Views: 24278

Re: Project: 18201 (Run 24975, Clone 0, Gen 21)

Hi Lazvon- Sorry to hear you're having troubles with 18201. Have you got a WU stuck now? As Joe mentions the issue with 18201 has been frustratingly difficult to pin down. Some WUs seem to hang for no apparent reason, despite the same system folding and returning 18201 WUs at the same time another i...
by jjmiller
Sat May 21, 2022 4:28 pm
Forum: Issues with a specific server
Topic: 128.252.203.13 and 128.252.203.11
Replies: 18
Views: 794

Re: 128.252.203.13 and 128.252.203.11

Hi rickoic, Thanks for raising this and apologies about the WU being refused. We've had a few of these instances with p18201/18202- it seems like something is slightly awry with the server/WU/connections and we can't quite put our finger on it. Frustratingly, these "transfer failed" errors...
by jjmiller
Thu May 19, 2022 2:38 pm
Forum: Announcements - Folding Consortium
Topic: [GPU] Project 18201 now on FAH (GPU, OpenMM Core22)
Replies: 2
Views: 4668

Re: [GPU] Project 18201 now on FAH (GPU, OpenMM Core22)

As a quick update to this project- we've acquired a huge amount of data (around 3.4ms of aggregate simulation time per isoform!) and are in the process of analyzing this data now. We may decide to re-release this project in the future if we need further sampling, but for the time being we've paused ...
by jjmiller
Thu May 19, 2022 2:35 pm
Forum: Announcements - Folding Consortium
Topic: [GPU] Project 18202 now on FAH (GPU, OpenMM Core22)
Replies: 4
Views: 6133

Re: [GPU] Project 18202 now on FAH (GPU, OpenMM Core22)

Hi all, A quick note that we're reopening this project for a little while in order to get more sampling on some of our clones to match our other project (p18201) so we have truly equal comparisons between the datasets. You should start to see (if you haven't already) WUs from Clones 0 + 1 of this pr...
by jjmiller
Sun Mar 13, 2022 12:11 pm
Forum: Announcements - Folding Consortium
Topic: Project 18213 (GPU, OpenMM Core22)
Replies: 0
Views: 309

Project 18213 (GPU, OpenMM Core22)

<atoms v="302700"/> <timeout v="2"/> <deadline v="5"/> <stats-credit v="70000"/> In other p182XX projects we have simulated ApoE variants to try to understand the conformations that ApoE adopts in solution. We are also working to verify these findings in the ...
by jjmiller
Fri Feb 04, 2022 2:25 pm
Forum: Announcements - Folding Consortium
Topic: [GPU] Project 18202 now on FAH (GPU, OpenMM Core22)
Replies: 4
Views: 6133

Re: [GPU] Project 18202 now on FAH (GPU, OpenMM Core22)

Hi all, One more note on this project. We've finished a first pass analysis on the data we collected for p18202 and have written a paper detailing this analysis and findings. While this paper is still in peer review for official publication, we've made the paper available via the biology preprinting...
by jjmiller
Tue Feb 01, 2022 9:52 pm
Forum: Issues with a specific server
Topic: Upload failures to mostly *.wustl.edu endpoints
Replies: 15
Views: 9517

Re: Upload failures to mostly *.wustl.edu endpoints

Excellent!! Glad that you were able to upload these!
by jjmiller
Tue Feb 01, 2022 6:23 pm
Forum: V7.6.x Public Release Windows/Linux/MacOS X
Topic: Repeatedly no response from WU-Server
Replies: 10
Views: 1218

Re: Repeatedly no response from WU-Server

Hi KhaleedWalten01, Would you be willing to provide the Project/Run/Clone/Gen codes for a few of the WUs that are stuck? In particular it would be good if there's a WU that is currently stuck. I've been working to with the lead FAH developer to try and track down what exactly is going awry here. Tha...
by jjmiller
Sun Nov 28, 2021 8:51 pm
Forum: Issues with a specific server
Topic: 18201 Upload repeating fails at 57.27% - (60 seconds)
Replies: 29
Views: 64245

Re: 18201 Upload repeating fails at 57.27% - (60 seconds)

Thanks- we captured some packet data on WUs from another user which I'm hoping we'll be able to look at once everyone's back from the holiday. As far as I'm aware we haven't changed anything on our end at all either, but I'll ask around tomorrow. Has anyone had this issue on other projects, or has i...
by jjmiller
Tue Nov 23, 2021 1:55 pm
Forum: Issues with a specific server
Topic: 18201 Upload repeating fails at 57.27% - (60 seconds)
Replies: 29
Views: 64245

Re: 18201 Upload repeating fails at 57.27% - (60 seconds)

Max-packet used to be a setting that could be used for folks working on dial-up modems but I don't think it is widely used any more (and may not be supported?). No, but good thinking. There are several WUs that have been reported stuck but have not been quick failed. Right? That's the thing I keep s...
by jjmiller
Fri Nov 19, 2021 3:45 pm
Forum: Issues with a specific WU
Topic: .WU not uploading
Replies: 14
Views: 38799

Re: .WU not uploading

Oleg, I did manage to get a TCP capture setup. Would you be willing to post one of the following to help in our TCP analysis? 1) Windows for attempted returns from UTC: 2021-11-19 15:40 to 18:40. (e.g. in your most recent post 11:06:00-11:07:33) 2) Log file from the stuck WU trimmed to the time UTC:...
by jjmiller
Fri Nov 19, 2021 3:33 pm
Forum: Issues with a specific WU
Topic: .WU not uploading
Replies: 14
Views: 38799

Re: .WU not uploading

Ok- one additional suggestion while I hunt down whether we can do a TCP. If you are on a Desktop computer, could you try navigating to "advanced settings" on FAHcontrol (configure-> Advanced) and see if the "Power, pause work while on battery power." box is checked? The one case ...
by jjmiller
Fri Nov 19, 2021 1:37 am
Forum: Issues with a specific WU
Topic: .WU not uploading
Replies: 14
Views: 38799

Re: .WU not uploading

Oleg- thanks for posting! Are you still having this issue? We have had some rare issues with WUs not being returned to the server for reasons we haven't been able to track down yet. If you're still having this issue, we'd like to try a TCP capture to see if we can get an idea of what's going on. Tha...